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Platform GPL20887 Query DataSets for GPL20887
Status Public on Mar 21, 2016
Title MI MT3001 M tuberculosis
Technology type spotted oligonucleotide
Distribution commercial
Organism Mycobacterium tuberculosis
Manufacturer Microarrays Inc, Huntsville, AL (USA)
Manufacture protocol printed in triplicate on Corning epoxide slides
 
 
Submission date Sep 04, 2015
Last update date Mar 21, 2016
Contact name Brian Weinrick
Organization name Trudeau Institute
Street address 154 Algonquin Avenue
City Saranac Lake
State/province NY
ZIP/Postal code 12983
Country USA
 
Samples (12) GSM1869377, GSM1869378, GSM1869379, GSM2056936, GSM2056937, GSM2056938 
Series (4)
GSE72745 Transcriptional Response of Mycobacterium tuberculosis to Growth without Detergent
GSE77711 Transcriptional Response of Mycobacterium tuberculosis to Arabinomannan-specific Immune Sera
GSE86184 Effect of addition of cysteine to isoniazid treatment of Mycobacterium tuberculosis

Data table header descriptions
ID
SEQUENCE probe sequence
ORF H37Rv strain ORF name (Sanger)
TIGR_CDC1551_ORF_name CDC1551 strain ORF name
Gene_Symbol gene symbols
Description gene description

Data table
ID SEQUENCE ORF TIGR_CDC1551_ORF_name Gene_Symbol Description
c13_01 ATCGTTACCATAACCAGTACGGGCTATAACCCCTTCGAGTAGAAAGCTCGAACTCCTACTCGAGCATTAG Negative control randomized 70mer
c148_01 GCGACCACTCTAGATGGGCTATTTAGTAATGTCCATGCAGGAGACCTTTATAAGTAAGCCGAATCCTAGT Negative control randomized 70mer
c15_01 GCCCCGTTAAGAATAGTTAATTCGTTTTTATGGAAAGATGACTACTTAGTAGGCCCCCCCCATACACAAA Negative control randomized 70mer
c155_01 CATGCGCGCCCGGTCTCACCCTCCTACAGGCAGCTTTCGAGTTAGAATCGAGCGTATCAGTGTGTTCGAT Negative control randomized 70mer
c16_01 GCGCGTCCAAACTTGACACGCTTCACCCCCCATACCTTGATTCGGATTACGCAGTATAGAGTACTGGTGC Negative control randomized 70mer
c178_01 GAAGCGACTAGATTGGGCGAAATCCAAATGACTCTATAGGACTTAGGTTAATAACCAGGTATCACCCACT Negative control randomized 70mer
c180_01 TTCTGGATCCACTCCCTTTTTTCCTGATACAACCTATATCCTGACTCATCAGAGATAATCGTCTCAAACT Negative control randomized 70mer
c191_01 GCTGTAAAAATCGAGTATACATGAAACTGCTCGGTGTTTTTTAGTGCAGGGTCAAGCCCAGCCCTCAGAT Negative control randomized 70mer
c203_01 GACACATTTTGCCCGCTTCTAAAGCTAAAGTTTCTCGTACTTTAAGGACTAGTCACCCCCACCTTCCCAC Negative control randomized 70mer
c207_01 ATACATTCAGCACCTTACGTGGTTATATTATTTAAAATGCGTCTCCTCGCCCTACAACATCATCCAGCAA Negative control randomized 70mer
c215_01 TAAATACAGAAATAGTACCGGTGACAGGGGGCTGGTTTTCTAGGAAGCCTTATGAAGGTACCGCAAAAAA Negative control randomized 70mer
c229_01 CTGGTAGGATATTTGATCTCTTCCAGACCCCTCACCCTTCTAATATTACGCAGGCGCGAGTGCATGCAGC Negative control randomized 70mer
c234_01 CAATTCGGAGTATTTCCAGGGTCCTATTCACTCGGATATATGAGGTATTGGGGTTGAGCGTGCAAACACA Negative control randomized 70mer
c24_01 ACATAGCAATTTAGGGGTCGGAATGGAATGTTATTAGACGAACCTTACGCACGCAATCAGTTGATGCGTG Negative control randomized 70mer
c242_01 TTACTCTGCAGTTGGTCGTACGCACATGTAAGAAAACAGTCATATCACTACCGGCATAGGCGCCTGCAGA Negative control randomized 70mer
c3_01 AACGGAACAGACAAACCGCATTACCAAAATTATATGCAACTATTCTCGCTTCGTGAAGCCCAGCAGACGA Negative control randomized 70mer
c37_01 ACCTGGAAGCTAAAGAAGTCGGAAGGAGAGACAGAGCCTTGGATTGTAATGTGGTACTGGGTTGCACGGC Negative control randomized 70mer
c38_01 GAAGTTATACTGACCACGATCGGCCACTGTAAAATAATAACTGCAACCGCCAAACCATATGCATCTAGGA Negative control randomized 70mer
c47_01 CGATGGCATTCGACTTTATGGGGAGCGATGTACTTTCCACACAAGAAGATATCGTAACATAAAGATGGAG Negative control randomized 70mer
c56_01 CGGAAACTACAATTGCTGTCTTTTAACATCTCTCCTGTTTCTTATGCGACTACTTCACGAGCCCTTAGGA Negative control randomized 70mer

Total number of rows: 4530

Table truncated, full table size 568 Kbytes.




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