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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 21, 2016 |
| Title |
[bMxHERV3b520850] Affymetrix HERVV3 Array |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
Affymetrix
|
| |
|
| |
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| Submission date |
Sep 20, 2016 |
| Last update date |
Sep 21, 2016 |
| Contact name |
Jeremie FC Becker |
| Organization name |
bioMérieux
|
| Department |
Medical diagnostic Discovery department
|
| Lab |
Laboratoire Commun de Recherche Hospices Civils de Lyon-bioMérieux
|
| Street address |
Centre Hospitalier Lyon Sud, Bâtiment 3F
|
| City |
Pierre Bénite |
| ZIP/Postal code |
69495 |
| Country |
France |
| |
|
| Samples (419)
|
GSM2323236, GSM2323237, GSM2323238, GSM2323239, GSM2323240, GSM2323241
GSM2323242, GSM2323243, GSM2323244, GSM2323245, GSM2323246, GSM2323247, GSM2323248, GSM2323249, GSM2323250, GSM2323251, GSM2323252, GSM2323253, GSM2323254, GSM2323255, GSM2323256, GSM2323257, GSM2323258, GSM2323259, GSM2323260, GSM2323261, GSM2323262, GSM2323263, GSM2323264, GSM2893508, GSM2893509, GSM2893510, GSM2893511, GSM2893512, GSM2893513, GSM2893514, GSM2893515, GSM2893516, GSM2893517, GSM2893518, GSM2893519, GSM2893520, GSM2893521, GSM2893522, GSM2893523, GSM2893524, GSM2893525, GSM2893526, GSM2893527, GSM2893528, GSM2893529, GSM2893530, GSM2893531, GSM2893532, GSM2893533, GSM2893534, GSM2893535, GSM2893536, GSM2893537, GSM2893538, GSM2893539, GSM2893540, GSM2893541, GSM2893542, GSM2893543, GSM2893544, GSM2893545, GSM2893546, GSM2893547, GSM2893548, GSM2893549, GSM2893550, GSM2893551, GSM2893552, GSM3431883, GSM3431884, GSM3431885, GSM3431886, GSM3431887, GSM3431888, GSM3431889, GSM3431890, GSM3431891, GSM3431892, GSM3431893, GSM3431894, GSM3431895, GSM3431896, GSM3431897, GSM3431898, GSM3431899, GSM3431900, GSM3431901, GSM3431902, GSM3431903, GSM3431904, GSM3431905, GSM3431906, GSM3431907, GSM3431908, GSM3431909, GSM3431910, GSM3431911, GSM3431912, GSM3431913, GSM3431914, GSM3431915, GSM3431916, GSM3431917, GSM3431918, GSM3431919, GSM3431920, GSM3431921, GSM3431922, GSM3431923, GSM3431924, GSM3431925, GSM3431926, GSM3431927, GSM3431928, GSM3431929, GSM3431930, GSM3431931, GSM3431932, GSM3431933, GSM3431934, GSM3431935, GSM3431936, GSM3431937, GSM3431938, GSM3431939, GSM3431940, GSM3431941, GSM3431942, GSM3431943, GSM3431944, GSM3431945, GSM3431946, GSM3431947, GSM3431948, GSM3431949, GSM3431950, GSM3431951, GSM3431952, GSM3431953, GSM3431954, GSM3431955, GSM3431956, GSM3431957, GSM3431958, GSM3431959, GSM3431960, GSM3431961, GSM3431962, GSM3431963, GSM3431964, GSM3431965, GSM3431966, GSM3431967, GSM3431968, GSM3431969, GSM3431970, GSM3431971, GSM3431972, GSM3431973, GSM3431974, GSM3431975, GSM3431976, GSM3431977, GSM3431978, GSM3431979, GSM3431980, GSM3431981, GSM3431982, GSM3431983, GSM3431984, GSM3431985, GSM3431986, GSM3431987, GSM3431988, GSM3431989, GSM3431990, GSM3431991, GSM3431992, GSM3431993, GSM3431994, GSM3431995, GSM3431996, GSM3431997, GSM3431998, GSM3431999, GSM3432000, GSM3432001, GSM3432002, GSM3432003, GSM3432004, GSM3432005, GSM3432006, GSM3432007, GSM3432008, GSM3432009, GSM3432010, GSM3432011, GSM3432012, GSM3432013, GSM3432014, GSM3432015, GSM3432016, GSM3432017, GSM3432018, GSM3432019, GSM3432020, GSM3432021, GSM3432022, GSM3432023, GSM3432024, GSM3432025, GSM3432026, GSM3432027, GSM3432028, GSM3432029, GSM3432030, GSM3432031, GSM3432032, GSM3432033, GSM3432034, GSM3432035, GSM3432036, GSM3432037, GSM3432038, GSM3432039, GSM3432040, GSM3432041, GSM3432042, GSM3432043, GSM3432044, GSM3432045, GSM3432046, GSM3432047, GSM3432048, GSM3432049, GSM3432050, GSM3432051, GSM3432052, GSM3432053, GSM3432054, GSM3432055, GSM3432056, GSM3432057, GSM3432058, GSM3432059, GSM3432060, GSM3432061, GSM3432062, GSM3432063, GSM3432064, GSM3432065, GSM3432066, GSM3432067, GSM3432068, GSM3432069, GSM3432070, GSM3432071, GSM3432072, GSM3432073, GSM3432074, GSM3432075, GSM3432076, GSM3432077, GSM3432078, GSM3432079, GSM3432080, GSM3432081, GSM3432082, GSM3432083, GSM3432084, GSM3432085, GSM3432086, GSM3432087, GSM3432088, GSM3432089, GSM3432090, GSM3432091, GSM3432092, GSM3432093, GSM3432094, GSM3432095, GSM3432096, GSM3432097, GSM3432098, GSM3432099, GSM3432100, GSM3432101, GSM3432102, GSM3432103, GSM3432104, GSM3432105, GSM3432106, GSM3432107, GSM3432108, GSM3432109, GSM3432110, GSM3432111, GSM3432112, GSM3432113, GSM3432114, GSM3432115, GSM3432116, GSM3432117, GSM3432118, GSM3432119, GSM3432120, GSM3432121, GSM3432122, GSM3432123, GSM3432124, GSM3432125, GSM3432126, GSM3432127, GSM3432128, GSM3432129, GSM3432130, GSM3432131, GSM3432132, GSM3432133, GSM3432134, GSM3432135, GSM3432136, GSM3432137, GSM3432138, GSM3432139, GSM3432140, GSM3432141, GSM3432142, GSM3432143, GSM3432144, GSM3432145, GSM3432146, GSM3432147, GSM3432148, GSM3432149, GSM3432150, GSM3432151, GSM3432152, GSM3432153, GSM3432154, GSM3432155, GSM3432156, GSM3432157, GSM3432158, GSM3432159, GSM3432160, GSM3432161, GSM3432162, GSM3432163, GSM3432164, GSM3432165, GSM3432166, GSM3432167, GSM3432168, GSM3432169, GSM3432170, GSM3432171, GSM3432172, GSM3432173, GSM3432174, GSM3432175, GSM3432176, GSM3432177, GSM3432178, GSM3432179, GSM3432180, GSM3432181, GSM3432182, GSM3432183, GSM3432184, GSM3432185, GSM3432186, GSM3432187, GSM3432188, GSM3432189, GSM3432190, GSM3432191, GSM3432192, GSM3432193, GSM3432194, GSM3432195, GSM3432196, GSM3432197, GSM3432198, GSM3432199, GSM3432200, GSM3432201, GSM3432202, GSM3432203, GSM3432204, GSM3432205, GSM3432206, GSM3432207, GSM3432208, GSM3432209, GSM3432210, GSM3432211, GSM3432212, GSM3432213, GSM3432214, GSM3432215, GSM3432216, GSM3432217, GSM3432218, GSM3432219, GSM3432220, GSM3432221, GSM3432222, GSM3432223, GSM3432224, GSM3432225, GSM3432226, GSM3432227
|
| Series (5)
|
| GSE87134 |
A Comprehensive Hybridization Model Allows Whole HERV Transcriptome Profiling Using High Density Microarray |
| GSE108239 |
Analysis of HERV transcriptome in PBMCs upon dose dependent LPS stimulations identifies HERVs and genes shared signaling pathways |
| GSE121349 |
Modulation of LTR-retrotransposons expression in mHLA-DR stratified septic shock patients: a pilot study [IS] |
| GSE121350 |
Modulation of LTR-retrotransposons expression in septic shock patients: a pilot study [MIP] |
| GSE121352 |
Modulation of LTR-retrotransposons expression in mHLA-DR stratified septic shock patients: a pilot study |
|
| Data table header descriptions |
| ID |
|
| SPOT_ID |
|
| GB_LIST |
|
| ALIAS |
|
| repertoire |
|
| family |
|
| functional_region |
|
| Data table |
| ID |
SPOT_ID |
GB_LIST |
ALIAS |
repertoire |
family |
functional_region |
| 0000001-04-HK02-gag_at |
0000001-04-HK02-gag |
|
NA |
Centromeriques |
NA |
HML-2_gag |
| 0000001-04-HK02-gag_st |
0000001-04-HK02-gag |
|
NA |
Centromeriques |
NA |
HML-2_gag |
| 0000001-05-HK02-pro_at |
0000001-05-HK02-pro |
|
NA |
Centromeriques |
NA |
HML-2_pro |
| 0000001-05-HK02-pro_st |
0000001-05-HK02-pro |
|
NA |
Centromeriques |
NA |
HML-2_pro |
| 0000001-06-HK02-pol_at |
0000001-06-HK02-pol |
|
NA |
Centromeriques |
NA |
HML-2_pol |
| 0000001-06-HK02-pol_st |
0000001-06-HK02-pol |
|
NA |
Centromeriques |
NA |
HML-2_pol |
| 0000001-07-HK02-env_at |
0000001-07-HK02-env |
|
NA |
Centromeriques |
NA |
HML-2_env |
| 0000001-07-HK02-env_st |
0000001-07-HK02-env |
|
NA |
Centromeriques |
NA |
HML-2_env |
| 0000010-02-HK02-sLR_at |
0000010-02-HK02-sLR |
|
NA |
Centromeriques |
NA |
HERV-T:HML-2_LTRS_R |
| 0000010-02-HK02-sLR_st |
0000010-02-HK02-sLR |
|
NA |
Centromeriques |
NA |
HERV-T:HML-2_LTRS_R |
| 0000042-03-HK02-sLU5_at |
0000042-03-HK02-sLU5 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U5 |
| 0000042-03-HK02-sLU5_st |
0000042-03-HK02-sLU5 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U5 |
| 0000047-01-HK02-sLU3_at |
0000047-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
| 0000047-01-HK02-sLU3_st |
0000047-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
| 0000050-01-HK02-sLU3_at |
0000050-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
| 0000050-01-HK02-sLU3_st |
0000050-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
| 0000052-01-HK02-sLU3_at |
0000052-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
| 0000052-01-HK02-sLU3_st |
0000052-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
| 0000066-01-HK02-sLU3_at |
0000066-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
| 0000066-01-HK02-sLU3_st |
0000066-01-HK02-sLU3 |
|
NA |
Centromeriques |
NA |
HML-2_LTRS_U3 |
Total number of rows: 1378917
Table truncated, full table size 91176 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL22462_HERVV3.cdf.gz |
47.5 Mb |
(ftp)(http) |
CDF |
| GPL22462_HERVV3_PS_annotations.txt.gz |
3.6 Mb |
(ftp)(http) |
TXT |
| GPL22462_HERVV3_probes_sequences.fa.gz |
56.8 Mb |
(ftp)(http) |
FA |
|
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