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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 06, 2017 |
| Title |
NimbleGen Human CGH 2.1M Whole-Genome Tiling Array [100718_HG18_WG_CGH_v2D_HX1] |
| Technology type |
in situ oligonucleotide |
| Distribution |
commercial |
| Organism |
Homo sapiens |
| Manufacturer |
NimbleGen |
| Manufacture protocol |
see manufacturer's web site www.nimblegen.com
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| Description |
Annotation in this record based on hg18, NCBI human build 36.
Design name: 100718_HG18_WG_CGH_v2D_HX1
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| Submission date |
Jul 06, 2017 |
| Last update date |
Jul 06, 2017 |
| Organization |
NimbleGen Systems, Inc. |
| E-mail(s) |
geo@ncbi.nlm.nih.gov
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| Phone |
608-218-7600
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| URL |
http://www.nimblegen.com/
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| Street address |
504 S. Rosa Road
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| City |
Madison |
| State/province |
WI |
| ZIP/Postal code |
53719 |
| Country |
USA |
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| Samples (1009)
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GSM2694939, GSM2694940, GSM2694941, GSM2694942, GSM2694943, GSM2694944
GSM2694945, GSM2694946, GSM2694947, GSM2694948, GSM2694949, GSM2694950, GSM2694951, GSM2694952, GSM2694953, GSM2694954, GSM2694955, GSM2694956, GSM2694957, GSM2694958, GSM2694959, GSM2694960, GSM2694961, GSM2694962, GSM2694963, GSM2694964, GSM2694965, GSM2694966, GSM2694967, GSM2694968, GSM2694969, GSM2694970, GSM2694971, GSM2694972, GSM2694973, GSM2694974, GSM2694975, GSM2694976, GSM2694977, GSM2694978, GSM2694979, GSM2694980, GSM2694981, GSM2694982, GSM2694983, GSM2694984, GSM2694985, GSM2694986, GSM2694987, GSM2694988, GSM2694989, GSM2694990, GSM2694991, GSM2694992, GSM2694993, GSM2694994, GSM2694995, GSM2694996, GSM2694997, GSM2694998, GSM2694999, GSM2695000, GSM2695001, GSM2695002, GSM2695003, GSM2695004, GSM2695005, GSM2695006, GSM2695007, GSM2695008, GSM2695009, GSM2695010, GSM2695011, GSM2695012, GSM2695013, GSM2695014, GSM2695015, GSM2695016, GSM2695017, GSM2695018, GSM2695019, GSM2695020, GSM2695021, GSM2695022, GSM2695023, GSM2695024, GSM2695025, GSM2695026, GSM2695027, GSM2695028, GSM2695029, GSM2695030, GSM2695031, GSM2695032, GSM2934851, GSM2934852, GSM2934853, GSM2934854, GSM2934855, GSM2934856, GSM2934857, GSM2934858, GSM2934859, GSM2934860, GSM2934861, GSM2934862, GSM2934863, GSM2934864, GSM2934865, GSM2934866, GSM2934867, GSM2934868, GSM2934869, GSM2934870, GSM2934871, GSM2934872, GSM2934873, GSM2934874, GSM2934875, GSM2934876, GSM2934877, GSM2934878, GSM2934879, GSM2934880, GSM2934881, GSM2934882, GSM2934883, GSM2934884, GSM2934885, GSM2934886, GSM2934887, GSM2934888, GSM2934889, GSM2934890, GSM2934891, GSM2934892, GSM2934893, GSM2934894, GSM2934895, GSM2934896, GSM6512060, GSM6512061, GSM6512062, GSM6512063, GSM6512064, GSM6512065, GSM6512066, GSM6512067, GSM6512068, GSM6512069, GSM6512070, GSM6512071, GSM6512072, GSM6512073, GSM6512074, GSM6512075, GSM6512076, GSM6512077, GSM6512078, GSM6512079, GSM6512080, GSM6512081, GSM6512082, GSM6512083, GSM6512084, GSM6512085, GSM6512086, GSM6512087, GSM6512088, GSM6512089, GSM6512090, GSM6512091, GSM6512092, GSM6512093, GSM6512094, GSM6512095, GSM6512096, GSM6512097, GSM6512098, GSM6512099, GSM6512100, GSM6512101, GSM6512102, GSM6512103, GSM6512104, GSM6512105, GSM6512106, GSM6512107, GSM6512108, GSM6512109, GSM6512110, GSM6512111, GSM6512112, GSM6512113, GSM6512114, GSM6512115, GSM6512116, GSM6512117, GSM6512118, GSM6512119, GSM6512120, GSM6512121, GSM6512122, GSM6512123, GSM6512124, GSM6512125, GSM6512126, GSM6512127, GSM6512128, GSM6512129, GSM6512130, GSM6512131, GSM6512132, GSM6512133, GSM6512134, GSM6512135, GSM6512136, GSM6512137, GSM6512138, GSM6512139, GSM6512140, GSM6512141, GSM6512142, GSM6512143, GSM6512144, GSM6512145, GSM6512146, GSM6512147, GSM6512148, GSM6512149, GSM6512150, GSM6512151, GSM6512152, GSM6512153, GSM6512154, GSM6512155, GSM6512156, GSM6512157, GSM6512158, GSM6512159, GSM6512160, GSM6512161, GSM6512162, GSM6512163, GSM6512164, GSM6512165, GSM6512166, GSM6512167, GSM6512168, GSM6512169, GSM6512170, GSM6512171, GSM6512172, GSM6512173, GSM6512174, GSM6512175, GSM6512176, GSM6512177, GSM6512178, GSM6512179, GSM6512180, GSM6512181, GSM6512182, GSM6512183, GSM6512184, GSM6512185, GSM6512186, GSM6512187, GSM6512188, GSM6512189, GSM6512190, GSM6512191, GSM6512192, GSM6512193, GSM6512194, GSM6512195, GSM6512196, GSM6512197, GSM6512198, GSM6512199, GSM6512200, GSM6512201, GSM6512202, GSM6512203, GSM6512204, GSM6512205, GSM6512206, GSM6512207, GSM6512208, GSM6512209, GSM6512210, GSM6512211, GSM6512212, GSM6512213, GSM6512214, GSM6512215, GSM6512216, GSM6512217, GSM6512218, GSM6512219, GSM6512220, GSM6512221, GSM6512222, GSM6512223, GSM6512224, GSM6512225, GSM6512226, GSM6512227, GSM6512228, GSM6512229, GSM6512230, GSM6512231, GSM6512232, GSM6512233, GSM6512234, GSM6512235, GSM6512236, GSM6512237, GSM6512238, GSM6512239, GSM6512240, GSM6512241, GSM6512242, GSM6512243, GSM6512244, GSM6512245, GSM6512246, GSM6512247, GSM6512248, GSM6512249, GSM6512250, GSM6512251, GSM6512252, GSM6512253, GSM6512254, GSM6512255, GSM6512256, GSM6512257, GSM6512258, GSM6512259, GSM6512260, GSM6512261, GSM6512262, GSM6512263, GSM6512264, GSM6512265, GSM6512266, GSM6512267, GSM6512268, GSM6512269, GSM6512270, GSM6512271, GSM6512272, GSM6512273, GSM6512274, GSM6512275, GSM6512276, GSM6512277, GSM6512278, GSM6512279, GSM6512280, GSM6512281, GSM6512282, GSM6512283, GSM6512284, GSM6512285, GSM6512286, GSM6512287, GSM6512288, GSM6512289, GSM6512290, GSM6512291, GSM6512292, GSM6512293, GSM6512294, GSM6512295, GSM6512296, GSM6512297, GSM6512298, GSM6512299, GSM6512300, GSM6512301, GSM6512302, GSM6512303, GSM6512304, GSM6512305, GSM6512306, GSM6512307, GSM6512308, GSM6512309, GSM6512310, GSM6512311, GSM6512312, GSM6512313, GSM6512314, GSM6512315, GSM6512316, GSM6512317, GSM6512318, GSM6512319, GSM6512320, GSM6512321, GSM6512322, GSM6512323, GSM6512324, GSM6512325, GSM6512326, GSM6512327, GSM6512328, GSM6512329, GSM6512330, GSM6512331, GSM6512332, GSM6512333, GSM6512334, GSM6512335, GSM6512336, GSM6512337, GSM6512338, GSM6512339, GSM6512340, GSM6512341, GSM6512342, GSM6512343, GSM6512344, GSM6512345, GSM6512346, GSM6512347, GSM6512348, GSM6512349, GSM6512350, GSM6512351, GSM6512352, GSM6512353, GSM6512354, GSM6512355, GSM6512356, GSM6512357, GSM6512358, GSM6512359, GSM6512360, GSM6512361, GSM6512362, GSM6512363, GSM6512364, GSM6512365, GSM6512366, GSM6512367, GSM6512368, GSM6512369, GSM6512370, GSM6512371, GSM6512372, GSM6512373, GSM6512374, GSM6512375, GSM6512376, GSM6512377, GSM6512378, GSM6512379, GSM6512380, GSM6512381, GSM6512382, GSM6512383, GSM6512384, GSM6512385, GSM6512386, GSM6512387, GSM6512388, GSM6512389, GSM6512390, GSM6512391, GSM6512392, GSM6512393, GSM6512394, GSM6512395, GSM6512396, GSM6512397, GSM6512398, GSM6512399, GSM6512400, GSM6512401, GSM6512402, GSM6512403, GSM6512404, GSM6512405, GSM6512406, GSM6512407, GSM6512408, GSM6512409, GSM6512410, GSM6512411, GSM6512412, GSM6512413, GSM6512414, GSM6512415, GSM6512416, GSM6512417, GSM6512418, GSM6512419...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
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| Series (3) |
| GSE100845 |
CNV analysis of 140 Filipinos with Cleft Lip and/or Palate |
| GSE212166 |
CNV analysis of 869 individuals from the Philippines with cleft lip and/or cleft palate |
| GSE212296 |
Genome-wide analysis of copy number variation in humans with cleft lip and/or cleft palate identifies COBLL1, RIC1, and ARHGEF38 as clefting genes |
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| Data table header descriptions |
| ID |
PROBE_ID from .pos file |
| SEQ_ID |
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| CHROMOSOME |
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| RANGE_GB |
CHROMOSOME GenBank Accession number |
| RANGE_START |
POSITION. Probe start position (relative to the RANGE_GB) |
| RANGE_END |
Probe end position (relative to the RANGE_GB) |
| SEQUENCE |
probe sequence |
| Data table |
| ID |
SEQ_ID |
CHROMOSOME |
RANGE_GB |
RANGE_START |
RANGE_END |
SEQUENCE |
| CHR01FS000017781 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
17781 |
17840 |
TTTTTCAACATCAAAACACTAGCTTGAGATCAAGCCCAGACTTGGATCTGTCGTCTGAAT |
| CHR01FS000030659 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
30659 |
30718 |
AGGGCACATTCTTGCTGTGGCCATCAAGAGACTGTATAAATTCTATGACTTGTAGTTGTC |
| CHR01FS000031123 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
31123 |
31182 |
TTTATCCAGTGCTTCTGCTAGTCTAGTTCACTTCCAAAGACCCATGATTACCATGGCCCT |
| CHR01FS000032108 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
32108 |
32167 |
ACTTTATTCAAGAGCCTATTGTGCAAGCATAAGTGGCTGAGTCAGGTTCTCAACTCTGCT |
| CHR01FS000036566 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
36566 |
36625 |
GCAATCATGTAGACATCCTGATTCCAGACAATGTGTCTGGAGGCAGGGTTTACAGGACTT |
| CHR01FS000037196 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
37196 |
37255 |
TGAATGGGAAGAAATCAAGAATAGTTATACGAATATCACCATTGCATTAAAGCTCTCTTC |
| CHR01FS000038109 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
38109 |
38168 |
CATTCCCTCTGTATGCCATATTTGATAAAGCATTTGATAATCTTAGTCAATGCCTGGGCC |
| CHR01FS000039532 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
39532 |
39591 |
TGAAGTCAGGAGACACACATTCTATCTGATTTTCTACATTATCTGTTTGAAAAGGTTACC |
| CHR01FS000040816 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
40816 |
40875 |
GTACTTCTAATTTTTCACTTTACATCACATAATGAATGGATCCAAATATGTTATGGATAG |
| CHR01FS000042256 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
42256 |
42315 |
CCTCACTTTCTTCCTTCAGAATACTAAAGCTTCTTCTCTACTGACTGAGTCAATGGCCAA |
| CHR01FS000042535 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
42535 |
42594 |
CCTACAGTTCTGACTTTTTCACTAACTGCAGCATCATTTCTTTTCCAAGATGCATCATAC |
| CHR01FS000043737 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
43737 |
43796 |
GCTTTGTCAGTTTACGATGCTATTTCAGTTTTGTGCTCAGATTTGAGTGATTGCAGGAAG |
| CHR01FS000045589 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
45589 |
45648 |
CTCTTTTGTAAGACTAACAGCCCTCAAAATTTTTCATTCAGTGATGTCTTCCTCATTGCA |
| CHR01FS000046716 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
46716 |
46775 |
GCTCAATACAGGTCCTTTTGTGAATGATTACCTCACCCTCATGGAAACACACTCTTGTTA |
| CHR01FS000047089 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
47089 |
47148 |
GGTGCCATAAGTGAAGGTATCTCTGTCCACCCTGAATATATTTTCACTCCCTCATCTCAG |
| CHR01FS000048466 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
48466 |
48525 |
TCTGAACATCCTTTTTGTTTAATATAAGTCTGCATTTCCTGTTTGAAGATATGTGTCCCA |
| CHR01FS000049283 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
49283 |
49342 |
TCCATGTTTGCAGTGACAATATACATAAACAGTGTATGAAAACTCAAGTAAAATCTACTC |
| CHR01FS000050787 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
50787 |
50846 |
TTCCCACTTCATCATTACTAACCTCACTCACTCTGAACTTGATGAGAGCACCTGAGCATT |
| CHR01FS000052308 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
52308 |
52367 |
TAGGCACATGTAGGAAACAGCTTTCAGAGATGCCTTAACCGTAATTATGCATTTGTATTC |
| CHR01FS000052784 |
chr1:1-247249719 |
chr1 |
NC_000001.9 |
52784 |
52843 |
TTCAGAGTCTTCCCTTCTATCTGATTCAGTGGACCAAGTAAATGACTCTCTGGTAACAGA |
Total number of rows: 2161679
Table truncated, full table size 277557 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL23665_100718_HG18_WG_CGH_v2D_HX1.ndf.gz |
122.3 Mb |
(ftp)(http) |
NDF |
| GPL23665_100718_HG18_WG_CGH_v2D_HX1.pos.gz |
15.8 Mb |
(ftp)(http) |
POS |
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