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Platform GPL30413 Query DataSets for GPL30413
Status Public on Mar 30, 2022
Title Agilent-022357 JFEU_ver2
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Paralichthys olivaceus
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
 
Submission date Jul 20, 2021
Last update date Apr 01, 2022
Contact name Kei Nakayama
E-mail(s) kei_n@ehime-u.ac.jp
Organization name Ehime University
Department Center for Marine Environmental Studies
Street address 2-5 Bunkyo-cho
City Matsuyama
ZIP/Postal code 7908577
Country Japan
 
Samples (12) GSM5464113, GSM5464114, GSM5464115, GSM5464116, GSM5464117, GSM5464118 
Series (1)
GSE180511 Heavy oil exposure suppresses antiviral activities in Japanese flounder Paralichthys olivaceus infected with viral hemorrhagic septicemia virus (VHSV)

Data table header descriptions
ID
SPOT_ID
CONTROL_TYPE
ACCESSION_STRING
CHROMOSOMAL_LOCATION
DESCRIPTION
SEQUENCE

Data table
ID SPOT_ID CONTROL_TYPE ACCESSION_STRING CHROMOSOMAL_LOCATION DESCRIPTION SEQUENCE
CUST_4181_PI402576660 CUST_4181_PI402576660 FALSE CL2057Contig1 unmapped Collagen alpha-1(XVIII) chain OS=Homo sapiens GN=COL18A1 PE=1 SV=5 CAATAGTGAACCTGAAGGATGAGGTTCTGTTTGACAACTGGGATGCCATCTTCAATGATG
CUST_132_PI402576676 CUST_132_PI402576676 FALSE jf_gb_contig368 unmapped Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Campylobacter jejuni (strain RM1221) GN=mraY PE=3 SV=1 GATATTTTATTCAGGTGGCTGGAAGCGACCAAAAGAACGAAATCTCCCATTTCCTCGTGC
CUST_2865_PI402576660 CUST_2865_PI402576660 FALSE J-brain-2-1a-T3_G23 unmapped Thiamine-phosphate synthase OS=Synechococcus sp. (strain WH7803) GN=thiE PE=3 SV=1 ACTGGTGTGACTATTTTGTACCACCATCTCTTTTCACATTTATGACTTTGCTCCTAACAT
CUST_2037_PI402576660 CUST_2037_PI402576660 FALSE PAO-10-4a-T3_J08 unmapped Rap guanine nucleotide exchange factor-like 1 OS=Pongo pygmaeus GN=RAPGEFL1 PE=2 SV=1 ATTCTGGCTCTGGTGCGAGAGACACTTCAGTACAGTGAACATCCACCGGGTCTGCCTGGA
CUST_1016_PI402576660 CUST_1016_PI402576660 FALSE CL1519Contig1 unmapped Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) OS=Columba livia GN=SUCLA2 PE=1 SV=1 ATCTCCAACATGGAGGCGTCGTACTTGATGAACAGGTTGTACAGTTTCATCATGTTCTCC
CUST_5460_PI402576660 CUST_5460_PI402576660 FALSE PAO-8-4a-T3_D10 unmapped Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 PE=2 SV=1 TTTGCTCAGGGCAAATACATGCATGCTTTCACGGTTGCTCAAACACTTGTTGAGGACCTT
CUST_8704_PI402576660 CUST_8704_PI402576660 FALSE CL1045Contig1 unmapped Splicing factor 3A subunit 1 OS=Homo sapiens GN=SF3A1 PE=1 SV=1 ATCGAAGCCATTCACAAGGCTAAAGGACTAGTGGGAGAGGACGATACCAAGGAGAAAATT
CUST_9533_PI402576660 CUST_9533_PI402576660 FALSE J-brain-4-2a-T3_O16 unmapped Elongation of very long chain fatty acids protein 6 OS=Danio rerio GN=elovl6 PE=2 SV=1 AAGATGAGCTTCTGTTTCCTCAGGACAATGAAGAGAGTGTCACCCAGTTCTGGTGCTTTA
CUST_5812_PI402576660 CUST_5812_PI402576660 FALSE CL2034Contig1 unmapped Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2 CTTAAAAGATCAGATTTGGATCTGAATGGGGCAAAATGGGATCTGAATGGGCCAAAATTG
CUST_379_PI402576663 CUST_379_PI402576663 FALSE CX283641 unmapped Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Pongo abelii GN=ALG6 PE=2 SV=1 TGGGCACCTTAAAATGCAGTGCTAAGTATAAATATTGCTTTGGCTTTTGCATGAATATGA
CUST_7276_PI402576660 CUST_7276_PI402576660 FALSE J-liver-11-4a-T3_L10 unmapped CCCGGGAGAATTTCCACCGGGGGCCCCCCAAAGCCCAAAACTTCCCAAAGTTGGGGGGGG
CUST_427_PI402576663 CUST_427_PI402576663 FALSE CX283612 unmapped Serine/threonine-protein kinase ATR OS=Mus musculus GN=Atr PE=1 SV=2 ACCTTGTGAATCAATGATTTGAATCCTGATTTGTACATTGCCACAGCAAATCCAAAGCTG
CUST_668_PI402576676 CUST_668_PI402576676 FALSE CX284398 unmapped Host specificity protein J OS=Enterobacteria phage lambda GN=J PE=4 SV=1 AGAGCTCGATGTCTTTTCCTGCTTATAAAAATGGGCGATGACAGCTACCTGGTGTGCAAA
CUST_4512_PI402576660 CUST_4512_PI402576660 FALSE J-sk-4-3a-T3_L23 unmapped Mitogen-activated protein kinase kinase kinase kinase 3 OS=Mus musculus GN=Map4k3 PE=1 SV=4 ACAAAAGAAAATCCACAGAGATATCAAGGGTGCCAACATCCTCCTCAACAATCAGGGCGA
CUST_9191_PI402576660 CUST_9191_PI402576660 FALSE CL67Contig1 unmapped StAR-related lipid transfer protein 7, mitochondrial OS=Homo sapiens GN=STARD7 PE=1 SV=2 TAACTGTAGCTAATACGTGCGTTAGCGAGTCCGCTGTTTGTTTTGCCTTTGAGAACTTGA
CUST_7045_PI402576660 CUST_7045_PI402576660 FALSE PAO-3-3a-T3_J05 unmapped Zinc transporter ZupT OS=Stenotrophomonas maltophilia (strain R551-3) GN=zupT PE=3 SV=1 ATTCATTTCTGCAACTAATCATCGGAAACATCCCCTGTCTTATTTTCACGGCATCCGTTT
CUST_223_PI402576676 CUST_223_PI402576676 FALSE jf_gb_contig645 unmapped NADH-ubiquinone oxidoreductase chain 6 OS=Carassius auratus GN=MT-ND6 PE=3 SV=1 TGTCTTCTCTAGTCAGGTTTGGTCGACTATTTGGCTGGCAATAGACTGACCTAGGAGTAA
CUST_5564_PI402576660 CUST_5564_PI402576660 FALSE CL2833Contig1 unmapped ACTCCGAGCCTTTTACAGACACGTTGTTATTGCCGTTTATGTTTGTCGATATGAAAACTT
CUST_3487_PI402576660 CUST_3487_PI402576660 FALSE PAO-18-3a-T3_H09 unmapped TGGCAATACAACTAATTTAGACTGTTGGCTTTGAGCAACAGTCTCAGAACATATTTAGTT
CUST_9574_PI402576660 CUST_9574_PI402576660 FALSE J-liver-14-3a-T3_H22 unmapped CGTGTAGGACGACACAACGCAAAGTAAATTCAATGTATATTGAAAGTACAACAAGATACA

Total number of rows: 14373

Table truncated, full table size 2821 Kbytes.




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Supplementary file Size Download File type/resource
GPL30413_022357_D_GEO_20210720_mod.txt.gz 917.6 Kb (ftp)(http) TXT

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