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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 18, 2021 |
| Title |
NextSeq 2000 (Saccharomyces cerevisiae) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Saccharomyces cerevisiae |
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| Submission date |
Dec 18, 2021 |
| Last update date |
Dec 18, 2021 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (649)
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GSM5741640, GSM5741641, GSM5741642, GSM5741643, GSM6529262, GSM6529263
GSM6592063, GSM6592064, GSM6592065, GSM6592066, GSM6592067, GSM6592068, GSM6592069, GSM6592070, GSM6592071, GSM6592072, GSM6668361, GSM6668362, GSM6668363, GSM6668364, GSM6668365, GSM6668366, GSM6668367, GSM6674151, GSM6674152, GSM6674153, GSM6674154, GSM6675679, GSM6675680, GSM6675681, GSM6675682, GSM6675683, GSM6675684, GSM6675685, GSM6675686, GSM6675687, GSM6675688, GSM6675689, GSM6675690, GSM6675691, GSM6675692, GSM6675693, GSM6706492, GSM6706493, GSM6709618, GSM6709619, GSM6709621, GSM6709622, GSM6709623, GSM6709624, GSM6709625, GSM6709626, GSM6709627, GSM6709628, GSM6709629, GSM6709630, GSM6709825, GSM6709826, GSM6709827, GSM6709828, GSM6709829, GSM6709830, GSM6709831, GSM6709832, GSM6709833, GSM6709834, GSM6709835, GSM6709836, GSM6709837, GSM6709838, GSM6709839, GSM6709840, GSM6709841, GSM6709842, GSM6709843, GSM6709844, GSM6709845, GSM6709846, GSM6709847, GSM6709848, GSM6744252, GSM6744253, GSM6744254, GSM6744255, GSM6744256, GSM6744257, GSM6744258, GSM6744259, GSM6744260, GSM6744261, GSM6744262, GSM6744263, GSM6744264, GSM6744265, GSM6744266, GSM6744267, GSM6744268, GSM6744269, GSM6744270, GSM6744271, GSM6744272, GSM6744273, GSM6744274, GSM6744275, GSM6744276, GSM6744277, GSM6744278, GSM6744279, GSM6744280, GSM6744281, GSM6935283, GSM6935284, GSM6935285, GSM6935286, GSM6935287, GSM6935288, GSM6935289, GSM6935290, GSM6935291, GSM6935292, GSM6935293, GSM6935294, GSM6935295, GSM6935296, GSM6935297, GSM6935298, GSM6935299, GSM6935300, GSM6935301, GSM6935302, GSM6935303, GSM6935304, GSM6935305, GSM6935306, GSM6935307, GSM6935308, GSM6935309, GSM6935310, GSM6935311, GSM6935312, GSM6935313, GSM6935314, GSM6935315, GSM6935316, GSM6935317, GSM6935318, GSM6935319, GSM6935320, GSM6935321, GSM6935322, GSM6935323, GSM6935324, GSM6935325, GSM6935326, GSM6935327, GSM6935328, GSM6935329, GSM6935330, GSM6935331, GSM6935332, GSM6935333, GSM6935334, GSM6935335, GSM6935336, GSM6935337, GSM6935338, GSM6935339, GSM6935340, GSM6935341, GSM6935342, GSM7017779, GSM7017784, GSM7089917, GSM7089918, GSM7089919, GSM7089920, GSM7089921, GSM7089922, GSM7089923, GSM7089924, GSM7488355, GSM7488356, GSM7488357, GSM7488358, GSM7488359, GSM7488360, GSM7488361, GSM7488362, GSM7488363, GSM7488364, GSM7488365, GSM7488366, GSM7488367, GSM7488368, GSM7488369, GSM7488370, GSM7488371, GSM7488372, GSM7488373, GSM7488393, GSM7488394, GSM7488395, GSM7488396, GSM7488397, GSM7488398, GSM7488399, GSM7488400, GSM7488401, GSM7488402, GSM7488403, GSM7488404, GSM7488405, GSM7488406, GSM7488407, GSM7488408, GSM7488409, GSM7488410, GSM7488411, GSM7615606, GSM7615607, GSM7615608, GSM7615609, GSM7615610, GSM7615611, GSM7615612, GSM7615613, GSM7615614, GSM7615615, GSM7615616, GSM7615617, GSM7667342, GSM7667343, GSM7667344, GSM7667345, GSM7667346, GSM7667347, GSM7667348, GSM7667349, GSM7667358, GSM7667359, GSM7667360, GSM7667361, GSM7667362, GSM7667363, GSM7667376, GSM7667377, GSM7667382, GSM7667383, GSM7667384, GSM7667385, GSM7708580, GSM7708581, GSM7708582, GSM7708583, GSM7708584, GSM7708585, GSM7708586, GSM7708587, GSM7708588, GSM7708589, GSM7708590, GSM7708591, GSM7708592, GSM7708593, GSM7708594, GSM7708595, GSM7708596, GSM7708597, GSM7708598, GSM7708599, GSM7708600, GSM7708601, GSM7708602, GSM7708603, GSM7708604, GSM7708605, GSM7708606, GSM7708607, GSM7708608, GSM7708609, GSM7708610, GSM7708611, GSM7708612, GSM7708613, GSM7708614, GSM7708615, GSM7762050, GSM7762051, GSM7762052, GSM7762053, GSM7762054, GSM7762055, GSM7762056, GSM7762057, GSM7762058, GSM7762059, GSM7762063, GSM7762064, GSM7762065, GSM7762066, GSM7762067, GSM7762068, GSM7762069, GSM7762070, GSM7762071, GSM7762072, GSM7762073, GSM7762074, GSM7762075, GSM7762076, GSM7762077, GSM7762078, GSM7762079, GSM7762080, GSM7762081, GSM7762082, GSM7762083, GSM7762084, GSM7762085, GSM7762086, GSM7762087, GSM7762088, GSM7762089, GSM7762090, GSM7762091, GSM7762092, GSM7762093, GSM7762094, GSM7762095, GSM7762096, GSM7762097, GSM7762098, GSM7762099, GSM7762100, GSM7762101, GSM7762102, GSM7762103, GSM7762104, GSM7762105, GSM7762106, GSM7762107, GSM7762108, GSM7762109, GSM7762110, GSM7762111, GSM7762112, GSM7762113, GSM7762114, GSM7762115, GSM7762116, GSM7762117, GSM7762118, GSM7762119, GSM7762120, GSM7762121, GSM7762122, GSM7762123, GSM7762124, GSM7762125, GSM7762126, GSM7787301, GSM7787302, GSM7787303, GSM7787304, GSM7787305, GSM7787306, GSM7787307, GSM7787308, GSM7787309, GSM7787310, GSM7787311, GSM7787312, GSM7806589, GSM7806590, GSM7806591, GSM7806592, GSM7806593, GSM7806594, GSM7806595, GSM7806596, GSM7806597, GSM7806598, GSM7806599, GSM7806600, GSM7806601, GSM7806602, GSM7806603, GSM7806604, GSM7806605, GSM7806606, GSM7806607, GSM7806608, GSM7806609, GSM7806610, GSM7806611, GSM7806612, GSM7806613, GSM7806614, GSM7806615, GSM7806616, GSM7806617, GSM7806618, GSM7900887, GSM7900888, GSM7900889, GSM7900890, GSM7900891, GSM7900892, GSM7900893, GSM7900894, GSM7903688, GSM7903689, GSM7903690, GSM7903691, GSM7903692, GSM7903693, GSM7903694, GSM7903695, GSM7903696, GSM7903697, GSM7903698, GSM7903699, GSM7903700, GSM7903701, GSM7903702, GSM7903703, GSM7903704, GSM7903705, GSM7903706, GSM7903707, GSM7903708, GSM7903709, GSM7903710, GSM7903711, GSM7903712, GSM7903713, GSM7903714, GSM7903715, GSM7903716, GSM7903717, GSM7903718, GSM7903719, GSM7903720, GSM7903721, GSM7903722, GSM7903723, GSM7903724, GSM7903725, GSM7903726, GSM7903727, GSM7903728, GSM7903729, GSM7903730, GSM7903731, GSM7903732, GSM7903733, GSM7903734, GSM7903735, GSM7903736, GSM7903737, GSM7903738, GSM7903739, GSM7903740, GSM7903741, GSM7903742, GSM7903743, GSM7903744, GSM7903745, GSM7903746, GSM7903747, GSM7903748, GSM7903749, GSM7903750, GSM7903751, GSM7903752, GSM7903753, GSM7903754, GSM7903755, GSM7903756, GSM7903757, GSM7903758, GSM7903759, GSM7903760, GSM7903761, GSM7903762, GSM7903763, GSM7903764, GSM7903765, GSM7903766, GSM7903767, GSM7903768, GSM7903769, GSM7903770, GSM7903771, GSM7903772, GSM7903773, GSM7903774, GSM7903775, GSM7903776, GSM7903777...
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| Series (45)
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| GSE162194 |
Cohesin-dependent chromosome loop extrusion is limited by transcription and stalled replication forks |
| GSE191207 |
Cohesin-dependent chromosome loop extrusion is limited by transcription and stalled replication forks [RNA-seq] |
| GSE198148 |
Fob1-dependent condensin recruitment and loop extrusion on yeast chromosome III [Micro-C seq] |
| GSE198162 |
A nucleolar condensin-recruiting complex that regulates yeast chromosome III structure |
| GSE201436 |
Spt6 directly interacts with Cdc73 and is required for Paf1C occupancy at active genes in Saccharomyces cerevisiae |
| GSE212389 |
Ribosome profiling of ZPR1-depleted S.cerevisiae cells |
| GSE213689 |
Variation in Ubiquitin System Genes Creates Substrate-Specific Effects on Proteasomal Protein Degradation |
| GSE216309 |
High level and nature of transcriptional noise in yeast cells [MNase-Seq] |
| GSE216448 |
High level and nature of transcriptional noise in yeast cells [5'-Seq] |
| GSE216450 |
High level and nature of transcriptional noise in yeast cells |
| GSE216524 |
Analysing the effect of cellular energy levels on codon-specific ribosome occupancy in vivo |
| GSE217198 |
Detection of Ψ in RNA oligonucleotides and in tRNAs from S. cerevisiae strains by reverse transcription using RT-KTq I614Y |
| GSE217227 |
Large-scale reporter assay to assess expression and coactivator specificity of UAS-core promoter combinations (DNA) |
| GSE217229 |
Large-scale reporter assay to assess expression and coactivator specificity of UAS-core promoter combinations (RNA) |
| GSE217230 |
Large-scale reporter assay to assess expression and coactivator specificity of UAS-core promoter combinations |
| GSE218400 |
Measurement of mRNA stability during transcriptional memory in mutants for RNA degradation |
| GSE227006 |
Large-scale reporter assay to assess expression and coactivator specificity of UAS-core promoter combinations [III] |
| GSE235000 |
Genome-scale chromatin interaction dynamic measurements for key components of the RNA Pol II general transcription machinery [ChIP-seq] |
| GSE235002 |
Genome-scale chromatin interaction dynamic measurements for key components of the RNA Pol II general transcription machinery |
| GSE237436 |
Multivalent binding of the tardigrade Dsup protein to heterologous chromatin promotes yeast survival and longevity upon exposure to oxidative damage |
| GSE239568 |
Post-transcriptional regulation shapes the transcriptome of quiescent yeast |
| GSE240743 |
Comparing the gene expression profile between wildtype and gal80Δ mutant of S. cerevisiae in fructose and fructose-palatinose mixture |
| GSE242394 |
DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions (4C) |
| GSE242395 |
DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions (ChIP) |
| GSE242396 |
DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions (HiC) |
| GSE242398 |
DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions (MeDIP) |
| GSE242399 |
DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions (RNA) |
| GSE242400 |
DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions |
| GSE243449 |
Design, Construction, and Functional Characterization of a tRNA Neochromosome in Yeast |
| GSE244096 |
Deep indel mutagenesis reveals the impact of insertions and deletions on protein stability and function |
| GSE246322 |
The genetic architecture of protein stability |
| GSE247795 |
Transcriptional noise, gene activation, and roles of SAGA and Mediator Tail measured using nucleotide recoding single cell RNA-seq |
| GSE247953 |
Glucose stress causes mRNA retention in nuclear Nab2 condensates |
| GSE247954 |
SLAM-seq estimates of mRNA half-life changes in S. cerevisiae strains depleted for Dcp2 and Ccr4/Pop2 |
| GSE249469 |
A fluorescent assay for cryptic transcription in Saccharomyces cerevisiae [MNase-seq] |
| GSE249628 |
A fluorescent assay for cryptic transcription in Saccharomyces cerevisiae |
| GSE252384 |
Transcription Factor Condensates Mediate Clustering of MET Regulon and Enhancement in Gene Expression (ChIP-Seq) |
| GSE252385 |
Transcription Factor Condensates Mediate Clustering of MET Regulon and Enhancement in Gene Expression (RNA-Seq) |
| GSE252386 |
Transcription Factor Condensates Mediate Clustering of MET Regulon and Enhancement in Gene Expression |
| GSE253580 |
Deep mutational scanning quantifies DNA binding and predicts clinical outcomes of PAX6 variants |
| GSE254759 |
Growth regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes [ChIP-seq] |
| GSE254761 |
Growth regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes |
| GSE265942 |
Site saturation mutagenesis of 500 human protein domains |
| GSE266299 |
Genetics, energetics and allostery during a billion years of hydrophobic protein core evolution |
| GSE270792 |
Amyloids “at the border”: deep mutagenesis and random sequence extension reveal an incomplete amyloid-forming motif in Bri2 that turns amyloidogenic upon C-terminal extension |
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| Supplementary data files not provided |
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