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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 19, 2010 |
| Title |
Affymetrix GeneChip Human Genome U133A 2.0 Array [CDF: Brainarray Version 10, Hs133Av2_Hs_ENTREZG] |
| Technology type |
in situ oligonucleotide |
| Distribution |
commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
Standard Affymetrix Protocol
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| Description |
This is identical to GPL571 but a custom CDF environment was used to extract data [Brainarray Version 10]
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| Web link |
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp
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| Contributor(s) |
Hirsch H, Iliopolous D, Zhang Y, Joshi A, Jager S, Bulyk M, Liu S, Struhl K |
| Submission date |
Sep 14, 2009 |
| Last update date |
Oct 12, 2012 |
| Contact name |
Kevin Struhl |
| E-mail(s) |
Kevin@hms.harvard.edu
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| Phone |
617-432-2104
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| Fax |
617-432-2529
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| Organization name |
Harvard Medical School
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| Department |
Biological Chemistry and Molecular Pharamcology
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| Lab |
Kevin Struhl
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| Street address |
240 Longwood Ave.
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Samples (329)
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GSM448801, GSM448802, GSM448803, GSM448804, GSM448805, GSM448806
GSM448807, GSM448808, GSM448809, GSM448810, GSM448811, GSM448812, GSM448813, GSM448814, GSM448815, GSM448816, GSM448817, GSM448818, GSM448819, GSM448820, GSM448821, GSM448822, GSM448823, GSM448824, GSM448825, GSM448826, GSM448827, GSM448828, GSM448829, GSM448830, GSM448831, GSM448832, GSM448833, GSM448834, GSM448835, GSM448836, GSM448837, GSM448838, GSM448839, GSM448840, GSM448841, GSM448842, GSM448843, GSM448844, GSM448845, GSM448846, GSM448847, GSM448848, GSM448849, GSM552120, GSM552121, GSM552122, GSM552123, GSM552124, GSM552125, GSM552126, GSM552127, GSM552128, GSM552129, GSM552130, GSM552131, GSM757898, GSM757899, GSM757900, GSM757901, GSM757902, GSM757903, GSM757904, GSM757905, GSM757906, GSM757907, GSM757908, GSM757909, GSM757910, GSM757911, GSM757912, GSM757913, GSM757914, GSM757915, GSM757916, GSM757917, GSM757918, GSM757919, GSM757920, GSM757921, GSM757922, GSM757923, GSM757924, GSM757925, GSM757926, GSM757927, GSM757928, GSM757929, GSM757930, GSM757931, GSM757932, GSM757933, GSM757934, GSM757935, GSM757936, GSM757937, GSM757938, GSM757939, GSM757940, GSM757941, GSM757942, GSM757943, GSM757944, GSM757945, GSM757946, GSM757947, GSM757948, GSM757949, GSM757950, GSM757951, GSM757952, GSM757953, GSM757954, GSM757955, GSM757956, GSM757957, GSM757958, GSM757959, GSM757960, GSM757961, GSM757962, GSM757963, GSM757964, GSM757965, GSM757966, GSM757967, GSM757968, GSM757969, GSM757970, GSM757971, GSM757972, GSM757973, GSM757974, GSM757975, GSM757976, GSM757977, GSM757978, GSM757979, GSM757980, GSM757981, GSM757982, GSM757983, GSM757984, GSM757985, GSM757986, GSM757987, GSM757988, GSM757989, GSM757990, GSM757991, GSM757992, GSM757993, GSM757994, GSM757995, GSM757996, GSM757997, GSM757998, GSM757999, GSM758000, GSM758001, GSM758002, GSM758003, GSM758004, GSM758005, GSM758006, GSM758007, GSM758008, GSM758009, GSM758010, GSM758011, GSM758012, GSM758013, GSM758014, GSM758015, GSM758016, GSM758017, GSM758018, GSM758019, GSM758020, GSM758021, GSM758022, GSM758023, GSM758024, GSM758025, GSM758026, GSM758027, GSM758028, GSM758029, GSM758030, GSM758031, GSM758032, GSM758033, GSM758034, GSM758035, GSM758036, GSM758037, GSM758038, GSM758039, GSM758040, GSM758041, GSM758042, GSM758043, GSM758044, GSM758045, GSM758046, GSM758047, GSM758048, GSM758049, GSM758050, GSM758051, GSM758052, GSM758053, GSM758054, GSM758055, GSM758056, GSM758057, GSM758058, GSM758059, GSM758060, GSM758061, GSM758062, GSM758063, GSM758064, GSM758065, GSM758066, GSM758067, GSM758068, GSM758069, GSM758070, GSM758071, GSM758072, GSM758073, GSM758074, GSM758075, GSM758076, GSM758077, GSM758078, GSM758079, GSM758080, GSM758081, GSM758082, GSM758083, GSM758084, GSM758085, GSM758086, GSM758087, GSM758088, GSM758089, GSM758090, GSM758091, GSM758092, GSM758093, GSM758094, GSM758095, GSM758096, GSM758097, GSM758098, GSM758099, GSM758100, GSM758101, GSM758102, GSM758103, GSM758104, GSM758105, GSM758106, GSM758107, GSM758108, GSM758109, GSM758110, GSM758111, GSM758112, GSM758113, GSM758114, GSM758115, GSM758116, GSM758117, GSM758118, GSM758119, GSM758120, GSM758121, GSM758122, GSM758123, GSM758124, GSM758125, GSM758126, GSM758127, GSM758128, GSM758129, GSM758130, GSM758131, GSM758132, GSM758133, GSM758134, GSM758135, GSM758136, GSM758137, GSM758138, GSM758139, GSM758140, GSM758141, GSM758142, GSM758143, GSM758144, GSM758145, GSM758146, GSM758147, GSM758148, GSM758149, GSM758150, GSM758151, GSM758152, GSM758153, GSM758154, GSM758155, GSM758156, GSM758157, GSM758158, GSM758159, GSM758160, GSM758161, GSM758162, GSM758163, GSM758164, GSM758165
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| Series (3) |
| GSE17941 |
A Transcriptional Signature and Common Gene Networks Link Cancer with Metabolic Syndrome and Auto-immune Diseases |
| GSE22175 |
Inhibition of VCAM-1 expression by CORM-3: the role of the ubiquitin proteasome system, p38 and mitochondrial respiration |
| GSE30550 |
Temporal expression data from 17 health human subjects before and after they were challenged with live influenza (H3N2/Wisconsin) viruses |
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| Relations |
| Alternative to |
GPL571 (Alternative CDF [official]) |
| Data table header descriptions |
| ID |
|
| Gene_ID |
Entrez Gene ID |
| Description |
Full gene name |
| Data table |
| ID |
Gene_ID |
Description |
| 10_at |
10 |
N-acetyltransferase 2 (arylamine N-acetyltransferase) |
| 100_at |
100 |
adenosine deaminase |
| 1000_at |
1000 |
cadherin 2, type 1, N-cadherin (neuronal) |
| 10000_at |
10000 |
v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) |
| 10001_at |
10001 |
mediator complex subunit 6 |
| 10002_at |
10002 |
nuclear receptor subfamily 2, group E, member 3 |
| 10003_at |
10003 |
N-acetylated alpha-linked acidic dipeptidase 2 |
| 10004_at |
10004 |
N-acetylated alpha-linked acidic dipeptidase-like 1 |
| 10005_at |
10005 |
acyl-CoA thioesterase 8 |
| 10006_at |
10006 |
abl-interactor 1 |
| 10007_at |
10007 |
glucosamine-6-phosphate deaminase 1 |
| 10009_at |
10009 |
zinc finger and BTB domain containing 33 |
| 1001_at |
1001 |
cadherin 3, type 1, P-cadherin (placental) |
| 10010_at |
10010 |
TRAF family member-associated NFKB activator |
| 10013_at |
10013 |
histone deacetylase 6 |
| 10014_at |
10014 |
histone deacetylase 5 |
| 10015_at |
10015 |
programmed cell death 6 interacting protein |
| 10016_at |
10016 |
programmed cell death 6 |
| 10017_at |
10017 |
BCL2-like 10 (apoptosis facilitator) |
| 10018_at |
10018 |
BCL2-like 11 (apoptosis facilitator) |
Total number of rows: 11961
Table truncated, full table size 614 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL9188_Hs133Av2_Hs_ENTREZG.cdf.gz |
4.6 Mb |
(ftp)(http) |
CDF |
| GPL9188_Hs133Av2_Hs_ENTREZG_probe_tab.txt.gz |
2.7 Mb |
(ftp)(http) |
TXT |
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