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GEO accession:
Platform GPL9525
Query DataSets for GPL9525
Status
Public on Jan 11, 2010
Title
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [Alternative CDF: affy9939alt]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus
Manufacturer
Affymetrix
Manufacture protocol
This is identical to GPL6246 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.
Submission date
Nov 03, 2009
Last update date
Jan 18, 2013
Contact name
Marni J Falk
E-mail(s)
falkm@email.chop.edu
Phone
215-590-4564
Organization name
CHOP
Department
Pediatrics/ Human Genetics
Lab
ARC 1002c
Street address
3615 Civic Center Blvd
City
Philadelphia
State/province
PA
ZIP/Postal code
19104
Country
USA
Samples (4)
GSM467884
,
GSM467885
,
GSM467886
,
GSM467887
Series (1)
GSE18677
Cross-platform expression microarray performance in a mouse model of mitochondrial disease therapy
Relations
Alternative to
GPL6246
(Alternative CDF [official])
Data table header descriptions
ID
Remapped probe set defined by AffyProbeMiner
Official_Symbol
Number of probes in each probe set
Number_probes
Official gene symbol
Entrezgene_ID
NCBI Entrez gene ID
SPOT_ID
set of genes
ORF
Data table
ID
Official_Symbol
Number_probes
Entrezgene_ID
SPOT_ID
ORF
AFFYCUSTOMHF1
Ntrk1
14
18211
Ntrk1
AFFYCUSTOMHF10
EG667977;ENSMUSG00000073403
1
667977;69717
EG667977;ENSMUSG00000073403
AFFYCUSTOMHF100
Bzrpl1
25
70026
Bzrpl1
AFFYCUSTOMHF1000
1700084J12Rik;LOC207216
1
207216;73486
1700084J12Rik;LOC207216
AFFYCUSTOMHF10000
EG432502;EG620213;EG627889;EG630138;LOC628477;LOC669689;Rpl6
2
19988;432502;620213;627889;628477;630138;669689
EG432502;EG620213;EG627889;EG630138;LOC628477;LOC669689;Rpl6
AFFYCUSTOMHF10001
Itm2a
29
16431
Itm2a
AFFYCUSTOMHF10002
E4f1
31
13560
E4f1
AFFYCUSTOMHF10003
Abca17
1
381072
Abca17
AFFYCUSTOMHF10004
Plk1
25
18817
Plk1
AFFYCUSTOMHF10005
Batf2
25
74481
Batf2
AFFYCUSTOMHF10006
Oog2
13
381570
Oog2
AFFYCUSTOMHF10007
3110052M02Rik
15
73229
3110052M02Rik
AFFYCUSTOMHF10008
Bmp2k
20
140780
Bmp2k
AFFYCUSTOMHF1001
LOC623748;LOC677156
21
623748;677156
LOC623748;LOC677156
AFFYCUSTOMHF10010
RP23-438H3.2
35
69357
RP23-438H3.2
AFFYCUSTOMHF10011
C330001K17Rik
27
77609
C330001K17Rik
AFFYCUSTOMHF10012
Ntrk3
10
18213
Ntrk3
AFFYCUSTOMHF10013
Zcchc18
31
66995
Zcchc18
AFFYCUSTOMHF10014
Ear1;Ear10;Ear12;Ear3
2
13586;503845;53876;93725
Ear1;Ear10;Ear12;Ear3
AFFYCUSTOMHF10015
D14Ertd668e
25
219132
D14Ertd668e
Total number of rows:
42612
Table truncated, full table size
2949 Kbytes
.
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Supplementary file
Size
Download
File type/resource
GPL9525_affy9939alt.cdf.gz
9.8 Mb
(ftp)
(http)
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