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Series GSE101688 Query DataSets for GSE101688
Status Public on Sep 19, 2017
Title The TREM2-APOE pathway drives the transcriptional phenotype of dysfunctional microglia in neurodegenerative diseases III
Organism Mus musculus
Experiment type Expression profiling by array
Summary Microglia play a pivotal role in the maintenance of brain homeostasis, but lose their homeostatic function during the course of neurodegenerative disorders. We identified a specific APOE-dependent molecular signature in microglia isolated from mouse models of amyotrophic lateral sclerosis, multiple sclerosis and Alzheimer’s disease (SOD1, EAE and APP-PS1) and in microglia surrounding neuritic A-plaques in human Alzheimer’s disease brain. This is mediated by a switch from a (M0)-homeostatic to (MGnD)-neurodegenerative phenotype following phagocytosis of apoptotic neurons via the TREM2-APOE pathway. TREM2 induces APOE signaling which is a negative regulator of the transcription program in M0-homeostatic microglia. Targeting the TREM2-APOE pathway restores the M0-homeostatic signature of microglia in APP-PS1 and SOD1 mice and prevents from neuronal loss in an acute model of neurodegeneration. In SOD1 mice, TREM2 regulates MGnD in a gender-dependent manner. APOE-mediated MGnD microglia lose their tolerogenic function. Taken together, our work identifies the TREM2-APOE pathway as a major regulator of microglial functional phenotype in neurodegenerative diseases and serves as a novel target to restore homeostatic microglia.
MG550 custom-design Nanosting chips were used to identify disease-associated vs. homeostatic molecular microglia signature in microglia in different disease models and transgenic models.
 
Overall design Nanostring MG550 chip profile of FCRLS+ sorted microglia. Note: data show mRNA transcriptoms/100ng RNA
 
Contributor(s) Butovsky O
Citation(s) 28930663
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 AG051812 Microglial mechanisms of postoperative CNS inflammation and cognitive decline BRIGHAM AND WOMEN'S HOSPITAL Oleg Butovsky
R01 NS088137 Mechanism of regulation of CNS inflammation by microglia BRIGHAM AND WOMEN'S HOSPITAL Oleg Butovsky
Submission date Jul 20, 2017
Last update date Jul 25, 2021
Contact name Oleg Butovsky
E-mail(s) obutovsky@rics.bwh.harvard.edu
Phone 1-617-525-5313
Organization name Brigham and Women's Hospital, Harvard Medical School
Department Center of Neurologic Diseases
Lab Dr. Oleg Butovsky
Street address 77 Avenue Louis Pasteur, Office 614
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL23813 NanoString nCounter Mouse Gene Expression Custom Chip MG550
Samples (50)
GSM2712147 WT_naive_score0_01
GSM2712148 WT_naive_score0_02
GSM2712149 WT_naive_score0_03
This SubSeries is part of SuperSeries:
GSE101689 The TREM2-APOE pathway drives the transcriptional phenotype of dysfunctional microglia in neurodegenerative diseases
Relations
BioProject PRJNA395209

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101688_RAW.tar 370.0 Kb (http)(custom) TAR (of RCC)
Processed data included within Sample table

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