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GEO accession:
Series GSE103427
Query DataSets for GSE103427
Status
Public on Nov 06, 2017
Title
Profiling of the transcriptional response to all-trans retinoic acid in breast cancer cells reveals RARE-independent mechanisms of gene expression
Organism
Homo sapiens
Experiment type
Methylation profiling by genome tiling array
Expression profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29192143
Submission date
Sep 04, 2017
Last update date
Jul 25, 2021
Contact name
Paola Marcato
Organization name
Dalhousie University
Department
Pathology
Street address
PO Box 15000
City
Halifax
State/province
Nova Scotia
ZIP/Postal code
B3H 4R2
Country
Canada
Platforms (2)
GPL13534
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL16686
[HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (72)
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More...
GSM2771070
231_mscv_nt_rep1 [methylation]
GSM2771071
231_mscv_ra_rep1 [methylation]
GSM2771072
231_mscv_dac_rep1 [methylation]
GSM2771073
231_1a3_nt_rep1 [methylation]
GSM2771074
468_smp_dac_rep1 [methylation]
GSM2771075
468_smp_nt_rep1 [methylation]
GSM2771076
468_smp_ra_rep1 [methylation]
GSM2771077
468_1a3kd_nt_rep1 [methylation]
GSM2771078
231_mscv_nt_rep2 [methylation]
GSM2771079
231_mscv_ra_rep2 [methylation]
GSM2771080
231_mscv_dac_rep2 [methylation]
GSM2771081
231_1a3_nt_rep2 [methylation]
GSM2771082
468_smp_dac_rep2 [methylation]
GSM2771083
468_smp_nt_rep2 [methylation]
GSM2771084
468_smp_ra_rep2 [methylation]
GSM2771085
468_1a3kd_nt_rep2 [methylation]
GSM2771086
231_mscv_nt_rep3 [methylation]
GSM2771087
231_mscv_ra_rep3 [methylation]
GSM2771088
231_mscv_dac_rep3 [methylation]
GSM2771089
231_1a3_nt_rep3 [methylation]
GSM2771090
468_smp_dac_rep3 [methylation]
GSM2771091
468_smp_nt_rep3 [methylation]
GSM2771092
468_smp_ra_rep3 [methylation]
GSM2771093
468_1a3kd_nt_rep3 [methylation]
GSM2771094
231_mscv_nt_rep1
GSM2771095
468_smp_dac_ra_rep1
GSM2771096
468_1a3kd_dac_rep1
GSM2771097
468_1a3kd_dac_ra_rep1
GSM2771098
468_smp_nt_rep1
GSM2771099
468_smp_ra_rep1
GSM2771100
468_1a3kd_nt_rep1
GSM2771101
468_1a3kd_ra_rep1
GSM2771102
231_mscv_nt_rep2
GSM2771103
231_mscv_ra_rep2
GSM2771104
231_mscv_dac_rep2
GSM2771105
231_mscv_ra_rep1
GSM2771106
231_mscv_dac_ra_rep2
GSM2771107
231_1a3oe_nt_rep2
GSM2771108
231_1a3oe_ra_rep2
GSM2771109
231_1a3oe_dac_rep2
GSM2771110
231_1a3_dac_ra_rep2
GSM2771111
468_smp_dac_rep2
GSM2771112
468_smp_dac_ra_rep2
GSM2771113
468_1a3kd_dac_rep2
GSM2771114
468_1a3kd_dac_ra_rep2
GSM2771115
468_smp_nt_rep2
GSM2771116
231_mscv_dac_rep1
GSM2771117
468_smp_ra_rep2
GSM2771118
468_1a3kd_nt_rep2
GSM2771119
468_1a3kd_ra_rep2
GSM2771120
231_mscv_nt_rep3
GSM2771121
231_mscv_ra_rep3
GSM2771122
231_mscv_dac_rep3
GSM2771123
231_mscv_dac_ra_rep3
GSM2771124
231_1a3oe_nt_rep3
GSM2771125
231_1a3oe_ra_rep3
GSM2771126
231_1a3oe_dac_rep3
GSM2771127
231_mscv_dac_ra_rep1
GSM2771128
231_1a3oe_dac_ra_rep3
GSM2771129
468_smp_dac_rep3
GSM2771130
468_smp_dac_ra_rep3
GSM2771131
468_1a3kd_dac_rep3
GSM2771132
468_1a3kd_dac_ra_rep3
GSM2771133
468_smp_nt_rep3
GSM2771134
468_smp_ra_rep3
GSM2771135
468_1a3kd_nt_rep3
GSM2771136
468_1a3kd_ra_rep3
GSM2771137
231_1a3oe_nt_rep1
GSM2771138
231_1a3oe_ra_rep1
GSM2771139
231_1a3oe_dac_rep1
GSM2771140
231_1a3oe_dac_ra_rep1
GSM2771141
468_smp_dac_rep1
This SuperSeries is composed of the following SubSeries:
GSE103425
DNA methylation profiling of MDA-MB-231 and MDA-MB-468 after ALDH1A3 manipulation, all-trans retinoic acid treatment, decitabine treatment
GSE103426
Expression profiling of MDA-MB-231 and MDA-MB-468 after ALDH1A3 manipulation, all-trans retinoic acid treatment, decitabine treatment
Relations
BioProject
PRJNA401318
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE103427_RAW.tar
794.2 Mb
(http)
(custom)
TAR (of CEL, CHP, IDAT)
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