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Series GSE103616 Query DataSets for GSE103616
Status Public on Apr 30, 2019
Title High fat diet accelerates Barrett esophageal carcinogenesis by inducing a distinct IL-8 dependent immune reaction through alteration of the microbiome
Organism Mus musculus
Experiment type Expression profiling by array
Summary Barrett Esophagus (BE) is a risk factor for the development of esophageal adenocarcinoma (EAC). As endemic obesity emerges as a risk factor for increasing numbers of EAC we utilized our IL-1b mouse model of BE to understand the impact of a high fat diet (HFD) on disease progression. Indeed, increased dysplasia development in HFD treated IL-1b mice correlated with an accelerated cytokine response with specific upregulation of IL-8 in esophageal tissue, which could be confirmed by specific overexpression of IL-8 in the BE mouse model. Consequently we observed an influx of immature myeloid cells and neutrophils resulting in a decrease of regulatory NK T cells. HFD led to a specific shift in the gut microbiome, similar to that in human BE patients, being responsible for a specific inflammatory phenotype with elevated IL-1b and IL-8 which could be eliminated under germ free conditions and lead to an increased influx of cardia (Lgr5) stem cells into the esophagus giving rise to dysplasia.
 
Overall design Our mouse model of BE in which overexpression of IL-1b in the squamous esophagus induces chronic inflammation leads to metaplasia and dysplasia at the squamo-columnar junction (SCJ) in the mouse gastro-esophageal junction resembles the human disease. The impact of a high fat diet (HFD) and corresponding increase of specific upregulation of IL-8 in esophageal tissue on disease progression was investigated by comparing the gene expression profiles of mice overexpressing IL-1b and IL-8 and mice overexpressing IL-1b being fed with HFD or chow diet.
 
Contributor(s) Quante M, Wein F
Citation(s) 30998992
NIH grant(s)
Grant ID Grant title Affiliation Name
U01 CA143056 Inflammation and the esophageal tumor microenvironment UNIVERSITY OF PENNSYLVANIA Timothy Cragin Wang
U54 CA163004 The Role of the Microenvironment in Barrett's Esophagus Trustees of Columbia University in the City of New York Timothy Cragin Wang
Submission date Sep 07, 2017
Last update date Jul 25, 2021
Contact name Michael Quante
E-mail(s) michael.quante@tum.de
Organization name Technische Universität München
Department II Medizinische Klinik
Street address Ismaninger Str 22
City München
ZIP/Postal code 81675
Country Germany
 
Platforms (1)
GPL17400 [MoGene-2_1-st] Affymetrix Mouse Gene 2.1 ST Array [transcript (gene) version]
Samples (9)
GSM2776538 pl2.IL8, 1891, Cardia, 12 mo
GSM2776539 pl2.IL8, 1895, Cardia, 12 mo
GSM2776540 pl2.IL8, 1901, Cardia, 12 mo
Relations
BioProject PRJNA402075

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103616_RAW.tar 44.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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