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Series GSE104753 Query DataSets for GSE104753
Status Public on Jan 11, 2018
Title The role of LSD1 in Epithelial to Mesenchymal Transition
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Complex regulatory networks control epithelial-to-mesenchymal transition (EMT) but the underlying epigenetic control is poorly understood. Lysine-specific demethylase 1 (LSD1) is a key histone demethylase that alters the epigenetic landscape. Here we explored the role of LSD1 in global epigenetic regulation of EMT, cancer stem cells (CSCs), the tumour microenvironment, and therapeutic resistance in breast cancer. LSD1 induced pan-genomic gene expression in networks implicated in EMT and selectively elicits gene expression programs in CSCs whilst repressing non-CSC programs. LSD1 phosphorylation at serine-111 (LSD1-s111p) by chromatin anchored protein kinase C-theta (PKC-θ), is critical for its demethylase and EMT promoting activity and LSD1-s111p is enriched in chemoresistant cells in vivo. LSD1 couples to PKC-θ on the mesenchymal gene epigenetic template promotes LSD1-mediated gene induction. In vivo, chemotherapy reduced tumour volume, and when combined with an LSD1 inhibitor, abrogated the mesenchymal signature and promoted an innate, M1 macrophage-like tumouricidal immune response. Circulating tumour cells (CTCs) from metastatic breast cancer (MBC) patients were enriched with LSD1 and pharmacological blockade of LSD1 suppressed the mesenchymal and stem-like signature in these patient-derived CTCs. Overall, LSD1 inhibition may serve as a promising epigenetic adjuvant therapy to subvert its pleiotropic roles in breast cancer progression and treatment resistance.
 
Overall design 4 treatments (mock siRNA and LSD1 siRNA with or without PMA and TGF). 1 replicate each
 
Contributor(s) Hardy K, Zafar A, Rao S
Citation(s) 29311580
Submission date Oct 10, 2017
Last update date Jul 25, 2021
Contact name Kristine Hardy
E-mail(s) kristine.hardy@anu.edu.au
Organization name University of Canberra
Lab Cytokine Gene Expression
Street address University of Canberra
City Bruce
State/province ACT
ZIP/Postal code 0200
Country Australia
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (4)
GSM2807183 nonstim_mock_gene_expression
GSM2807184 PMATGF_mock_RNA_gene_expression
GSM2807185 nonstim_LSD1siRNA_gene_expression
This SubSeries is part of SuperSeries:
GSE104755 The role of LSD1 in Epithelial to Mesenchymal Transition: gene expression profiling and ChIP-seq
Relations
BioProject PRJNA413779

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104753_RAW.tar 35.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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