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Series GSE106930 Query DataSets for GSE106930
Status Public on Oct 30, 2018
Title Transcriptional regulation of lipophorin receptors supports neuronal adaptation to chronic elevations of activity
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Activity-dependent modifications strongly influence neural development. However, molecular programs underlying their context and circuit-specific effects are not well understood. To study global transcriptional changes associated with chronic elevation of synaptic activity, we performed cell-type-specific transcriptome profiling of Drosophila ventral lateral neurons (LNvs) in the developing visual circuit and identified activity-modified transcripts that are enriched in neuron morphogenesis, circadian regulation, and lipid metabolism and trafficking. Using bioinformatics and genetic analyses, we validated activity-induced isoform-specific upregulation of Drosophila lipophorin receptors LpR1 and LpR2, the homologues of mammalian low-density-lipoprotein receptor (LDLR) family proteins. Furthermore, our morphological and physiological studies uncovered critical functions of neuronal LpRs in maintaining the structural and functional integrities in neurons challenged by chronic elevations of activity. Together, our findings identify LpRs as molecular targets for activity-dependent transcriptional regulation and reveal the functional significance of cell-type-specific regulation of neuronal lipid uptake in experience-dependent plasticity and adaptive responses.
 
Overall design LNv neuron-specific mRNA profiling in Drosophila larvae subjected to different visual experiences during development
 
Contributor(s) Yin J, Yuan Q
Citation(s) 30380410
Submission date Nov 15, 2017
Last update date May 15, 2019
Contact name Jun Yin
E-mail(s) jun.yin@nih.gov
Organization name National Institutes of Health
Department NINDS
Lab Dendrite Morphogenesis and Plasticity Unit
Street address 35 Convent Drive, Room 1B-1006
City Bethesda
State/province Maryland (MD)
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (10)
GSM2857747 LD1
GSM2857748 LD2
GSM2857749 LD3
Relations
BioProject PRJNA418460
SRA SRP125033

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Supplementary file Size Download File type/resource
GSE106930_Expression_file_for_LNv_LDvsLL.txt.gz 504.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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