|
| Status |
Public on Mar 01, 2018 |
| Title |
5hmC-seq in human kidney DNA |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
DNA IP for 5hmC modified CpGs to determine 5hmC paterns across male human kidney
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| |
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| Overall design |
We carry out 5-hydroxymethylation DNA immunoprecipitation (hmeDIP) on covaris sheared genomic DNA (Amsbio), prior to sequencing Ion Proton P1 to report on the genome-wide 5hmC patterns.
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| Contributor(s) |
Thomson JP, Fawkes A |
| Citation missing |
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| Submission date |
Nov 15, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
John Paterson Thomson |
| E-mail(s) |
john.thomson@igmm.ed.ac.uk
|
| Organization name |
University of Edinburgh
|
| Department |
MRC Human Genetics Unit
|
| Lab |
Meehan
|
| Street address |
Crewe Road
|
| City |
Edinburgh |
| ZIP/Postal code |
EH4 2XU |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA418466 |
| SRA |
SRP125041 |
