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| Status |
Public on Nov 01, 2021 |
| Title |
Tiled Capture-C |
| Organism |
Mus musculus |
| Experiment type |
Other
|
| Summary |
Capture-C interaction profiles from the viewpoints of the promoters of Chac2, Cpeb4 and Fbxw11 in mouse erythroid and ES cells.
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| |
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| Overall design |
Capture-C combines 3C library preparation with oligonucleotide capture for the desired viewpoint restriction fragments. Experiments were performed in biological triplicates of primary erythroid and ES cells.
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| |
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| Contributor(s) |
Oudelaar AM, Telenius JM, Higgs DR, Hughes JR |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
May 04, 2018 |
| Last update date |
Nov 01, 2021 |
| Contact name |
A Marieke Oudelaar |
| E-mail(s) |
marieke.oudelaar@imm.ox.ac.uk
|
| Organization name |
University of Oxford
|
| Department |
MRC Weatherall Institute of Molecular Medicine
|
| Street address |
John Radcliffe Hospital
|
| City |
Oxford |
| ZIP/Postal code |
OX3 9DS |
| Country |
United Kingdom |
| |
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| Platforms (1) |
|
| Samples (6)
|
| GSM2878058 |
Mouse erythroid cells biological replicate 1; Capture-C, interacting promoters viewpoints |
| GSM2878059 |
Mouse erythroid cells biological replicate 2; Capture-C, interacting promoters viewpoints |
| GSM2878060 |
Mouse erythroid cells biological replicate 3; Capture-C, interacting promoters viewpoints |
| GSM2878061 |
Mouse ES cells replicate 1; Capture-C, interacting promoters viewpoints |
| GSM2878062 |
Mouse ES cells replicate 2; Capture-C, interacting promoters viewpoints |
| GSM2878063 |
Mouse ES cells replicate 3; Capture-C, interacting promoters viewpoints |
|
| Relations |
| BioProject |
PRJNA472055 |
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