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Series GSE114219 Query DataSets for GSE114219
Status Public on Aug 15, 2018
Title A single cell transcriptional portrait of embryoid body differentiation and comparison to progenitors of the developing embryo [bulk RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the application of bulk high-throughput transcriptional profiling of differentiating mouse embryoid bodies.
 
Overall design We examine four time points of the embryoid body directed differentiation protocol by bulk RNA sequencing: day 0, 2, 4, and 6.
 
Contributor(s) Spangler A, Cahan P
Citation(s) 30118958
Submission date May 09, 2018
Last update date Jan 27, 2019
Contact name Patrick Cahan
E-mail(s) patrick.cahan@jhmi.edu
Organization name Johns Hopkins University School of Medicine
Department ICE and Biomedical Engineering
Lab Cahan Lab
Street address 733 North Broadway, MRB 653
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (7)
GSM3138372 day0_mESC biol rep 1
GSM3138373 day2_EB biol rep 1
GSM3138374 day4_EB biol rep 1
This SubSeries is part of SuperSeries:
GSE114220 A single cell transcriptional portrait of embryoid body differentiation and comparison to progenitors of the developing embryo
Relations
BioProject PRJNA470653
SRA SRP145080

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114219_BulkExpDat.csv.gz 992.3 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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