NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE114907 Query DataSets for GSE114907
Status Public on May 26, 2018
Title Transcriptome analysis of the glioma stem cells infected with ZIKV
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Glioma stem cells derived from patient samples were infected with ZIKV at MOI of 1 for 48hrs, total RNA was extracted and deep sequenced to compare the gene expression profiles between mock and ZIKV infected cells
 
Overall design Triplicated 3 Mock samples and 3 ZIKV-infected samples were sequneced and compared
 
Contributor(s) Qin C, Ma F
Citation(s) 30228241
Submission date May 25, 2018
Last update date Jun 11, 2019
Contact name feng ma
Organization name CAMS
Department Suzhou Institute of Systems Medicine
Lab MaF Lab
Street address 218 Xinghu Street, B5-527
City Suzhou
State/province Jiangsu
ZIP/Postal code 215123
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (6)
GSM3154309 RNA-Seq of human GSC infected Mock-1
GSM3154310 RNA-Seq of human GSC infected Mock-2
GSM3154311 RNA-Seq of human GSC infected Mock-3
Relations
BioProject PRJNA473149
SRA SRP148993

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114907_ZN_vs_ZP_DE_results_with_gene_annotation.xls.gz 47.7 Kb (ftp)(http) XLS
GSE114907_gene.count.matrix_with_gene_annotation.txt.gz 18.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap