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Series GSE115128 Query DataSets for GSE115128
Status Public on Dec 04, 2018
Title Editing of measles virus genomic RNA by ADAR1
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNAseq analysis of purified measles virus RNA grown in standard HeLa cells, p150KO or ADAR1KO cells
 
Overall design Six samples: MeV-vac2(GFP) RNA from HeLa, p150KO and ADAR1KO cells; MeV-CKO(GFP) RNA from HeLa, p150KO and ADAR1KO cells
 
Contributor(s) Pfaller CK, Cattaneo R
Citation(s) 30496178
NIH grant(s)
Grant ID Grant title Affiliation Name
R21 AI128037 Measles virus C protein: polymerase interactions and innate immunity evasion MAYO CLINIC ROBERTO B. CATTANEO
Submission date May 30, 2018
Last update date Jan 25, 2019
Contact name Roberto Cattaneo
E-mail(s) cattaneo.roberto@mayo.edu
Organization name Mayo Clinic
Department Molecular Medicine
Street address 200 First Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (6)
GSM3167418 vac2(GFP) genomes from HeLa cells
GSM3167419 CKO(GFP) genomes from HeLa cells
GSM3167420 vac2(GFP) genomes from p150KO cells
This SubSeries is part of SuperSeries:
GSE115129 ADAR1-editing of cellular and measles virus-derived duplex RNA
Relations
BioProject PRJNA473842
SRA SRP149378

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115128_RAW.tar 2.6 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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