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| Status |
Public on Nov 14, 2019 |
| Title |
Transcriptome profiling of adult mouse bone marrow endothelial cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We performed RNA sequencing analyses of adult mouse bone marrow endothelial cells. Especially, we investigated gene expression profiling of endothelial cells before and after lethal irradiation or hematopoietic cell depletion. We also analyzed mouse bone marrow endothelial cell subtypes, Apln+ and diaphyseal endothelial cells. Whole bone marrow cells, lineage negative hematopoietic stem and progenitor cells, Lin- Sca1+ cKit+ cells were used as controls for the differential gene expression analyses.
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| |
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| Overall design |
Different adult mouse bone marrow cell populations were sorted by flowcytometry (FACS) for RNA sequencing
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| |
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| Contributor(s) |
Adams RH, Chen Q, Liu Y, Jeong H |
| Citation(s) |
31761723 |
| Submission date |
Jun 06, 2018 |
| Last update date |
Jan 27, 2020 |
| Contact name |
Hyun-Woo Jeong |
| E-mail(s) |
zionjeong@gmail.com
|
| Phone |
+4917631115236
|
| Organization name |
Max-Planck-Institute for Molecular Biomedicine
|
| Department |
Dept. Tissue Morphogenesis
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| Lab |
Adams
|
| Street address |
Roentgenstr.20
|
| City |
Muenster |
| State/province |
NRW |
| ZIP/Postal code |
48149 |
| Country |
Germany |
| |
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| Platforms (2) |
| GPL16417 |
Illumina MiSeq (Mus musculus) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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| Samples (33)
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| Relations |
| BioProject |
PRJNA474930 |
| SRA |
SRP149926 |
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