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Series GSE116321 Query DataSets for GSE116321
Status Public on Aug 01, 2018
Title Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse
Organisms Homo sapiens; Mus musculus
Experiment type Other
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Contributor(s) Tubbs A, Sridharan S, van Wietmarschen N, Maman Y, Callen E, Stanlie A, Wu W, Wu X, Day A, Wong N, Yin M, Canela A, Fu H, Redon C, Pruitt S, Jaszczyszyn Y, Aladjem M, Aplan P, Hyrien O, Nussenzweig A
Citation(s) 30078706
Submission date Jun 27, 2018
Last update date Jul 02, 2019
Contact name Andre Nussenzweig
E-mail(s) nussenza@mail.nih.gov
Organization name National Institutes of Health
Department National Cancer Institute
Lab Laboratory of Genome Integrity
Street address 9000 Rockville Pike, Building 37
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (3)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL21626 NextSeq 550 (Mus musculus)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (31)
GSM3227944 ES1: END_seq_aB_28h_HU_28h_10mM_rep1
GSM3227945 ES2: END_seq_aB_28h_HU_28h_10mM_rep2
GSM3227946 ES3: END_seq_aB_28h_HU_6h_10mM_rep1
This SuperSeries is composed of the following SubSeries:
GSE116315 END-seq profile in B,T, and HCT116 untreated and upon HU treatment
GSE116316 EdU-seq profile in B,untreated and upon HU treatment
GSE116317 Nascent RNA profile in B, and T cells untreated and upon HU treatment
Relations
BioProject PRJNA478131

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116321_RAW.tar 3.7 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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