|
| Status |
Public on Sep 28, 2018 |
| Title |
A mouse tissue atlas of small non-coding RNA |
| Organism |
Mus musculus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
We systematically profiled the expression of four sRNA classes across eleven mouse tissues by RNA-seq. Using fourteen biological replicates spanning both genders, we identified 3,962 various sRNAs; 473 of these sRNAs are novel and identified for the first time by this work.
|
| |
|
| Overall design |
Small non-coding RNA expression across 11 normal mouse tissues, 14 individuals
|
| |
|
| Contributor(s) |
Isakova A, Quake S |
| Citation(s) |
32356893 |
| Submission date |
Sep 07, 2018 |
| Last update date |
Jul 07, 2020 |
| Contact name |
Alina Isakova |
| E-mail(s) |
isakova@stanford.edu
|
| Organization name |
Stanford University
|
| Department |
Bioengineering
|
| Lab |
Quake lab
|
| Street address |
318 Campus drive
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94300 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL21626 |
NextSeq 550 (Mus musculus) |
|
| Samples (139)
|
|
| Relations |
| BioProject |
PRJNA489873 |
| SRA |
SRP160385 |
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