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GEO accession:
Series GSE122166
Query DataSets for GSE122166
Status
Public on Dec 02, 2019
Title
CEBPA Dysfunction Intiates CSF3R Mutant Acute Myeloid Leukemia Through Disruption of Myeloid Lineage Enhancers
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Expression profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31784538
,
32471953
Submission date
Nov 05, 2018
Last update date
Jul 02, 2020
Contact name
Theodore Paul Braun
E-mail(s)
braunt@ohsu.edu
Organization name
OHSU
Department
Knight Cancer Institute
Lab
3181 SW Sam Jackson Park Road
Street address
3181 SW Sam Jackson Park Road
City
Portland
State/province
OR
ZIP/Postal code
97239
Country
USA
Platforms (3)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL23038
[Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (63)
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GSM3457070
HoxB-Empty-Vector-A
GSM3457071
HoxB-Empty-Vector-B
GSM3457072
HoxB-Empty-Vector-C
GSM3457073
HoxB-CSF3R_T618I-A
GSM3457074
HoxB-CSF3R_T618I-B
GSM3457075
HoxB-CSF3R_T618I-C
GSM3457076
HoxB-CEBPA_V314VW-A
GSM3457077
HoxB-CEBPA_V314VW-B
GSM3457078
HoxB-CEBPA_V314VW-C
GSM3457079
HoxB-CSF3R_T618I+CEBPA_V314VW-A
GSM3457080
HoxB-CSF3R_T618I+CEBPA_V314VW-B
GSM3457081
HoxB-CSF3R_T618I+CEBPA_V314VW-C
GSM3457082
Empty-vector-replicate.1
GSM3457083
Empty-vector-replicate.2
GSM3457084
Empty-H3K4me1-ChIP-replicate.1
GSM3457085
Empty-H3K4me1-ChIP-replicate.2
GSM3457086
Empty-H3K4me3-ChIP-replicate.1
GSM3457087
Empty-H3K4me3-ChIP-replicate.2
GSM3457088
Empty-INPUT
GSM3457089
CSF3R.T618I-H3K27ac-ChIP-replicate.1
GSM3457090
CSF3R.T618I-H3K27ac-ChIP-replicate.2
GSM3457091
CSF3R.T618I-H3K4me1-ChIP-replicate.1
GSM3457092
CSF3R.T618I-H3K4me1-ChIP-replicate.2
GSM3457093
CSF3R.T618I-H3K4me3-ChIP-replicate.1
GSM3457094
CSF3R.T618I-H3K4me3-ChIP-replicate.2
GSM3457095
CSF3R.T618I-INPUT
GSM3457096
CEBPA.v314vw-H3K27ac-ChIP-replicate.1
GSM3457097
CEBPA.v314vw-H3K27ac-ChIP-replicate.2
GSM3457098
CEBPA.v314vw--H3K4me1-ChIP-replicate.1
GSM3457099
CEBPA.v314vw-H3K4me1-ChIP-replicate.2
GSM3457100
CEBPA.v314vw-H3K4me3-ChIP-replicate.1
GSM3457101
CEBPA.v314vw-H3K4me3-ChIP-replicate.2
GSM3457102
CEBPA.v314vw-INPUT
GSM3457103
CSF3R.T618I+CEBPA.v314vw-H3K27ac-ChIP-replicate.1
GSM3457104
CSF3R.T618I+CEBPA.v314vw-H3K27ac-ChIP-replicate.2
GSM3457105
CSF3R.T618I+CEBPA.v314vw-H3K4me1-ChIP-replicate.1
GSM3457106
CSF3R.T618I+CEBPA.v314vw-H3K4me1-ChIP-replicate.2
GSM3457107
CSF3R.T618I+CEBPA.v314vw-H3K4me3-ChIP-replicate.1
GSM3457108
CSF3R.T618I+CEBPA.v314vw-H3K4me3-ChIP-replicate.2
GSM3457109
CSF3R.T618I+CEBPA.v314vw-INPUT
GSM3457110
CSF3R-only-A
GSM3457111
CSF3R-only-B
GSM3457112
CSF3R-only-C
GSM3457113
CSF3R-only-D
GSM3457114
CEBPA-first-A
GSM3457115
CEBPA-first-B
GSM3457116
CEBPA-first-C
GSM3457117
CEBPA-first-D
GSM3457118
CSF3R-first-A
GSM3457119
CSF3R-first-B
GSM3457120
CSF3R-first-C
GSM3457121
Mouse-Lin-Neg-Empty-A
GSM3457122
Mouse-Lin-Neg-Empty-B
GSM3457123
Mouse-Lin-Neg-Empty-C
GSM3457124
Mouse-Lin-Neg-CSF3R_T618I-A
GSM3457125
Mouse-Lin-Neg-CSF3R_T618I-B
GSM3457126
Mouse-Lin-Neg-CSF3R_T618I-C
GSM3457127
Mouse-Lin-Neg-CEBPA_V314VW-A
GSM3457128
Mouse-Lin-Neg-CEBPA_V314VW-B
GSM3457129
Mouse-Lin-Neg-CEBPA_V314VW-C
GSM3457130
Mouse-Lin-Neg-CEBPA_V314VW+CSF3R_T618I-A
GSM3457131
Mouse-Lin-Neg-CEBPA_V314VW+CSF3R_T618I-B
GSM3457132
Mouse-Lin-Neg-CEBPA_V314VW+CSF3R_T618I-C
This SuperSeries is composed of the following SubSeries:
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GSE122161
CEBPA Dysfunction Intiates CSF3R Mutant Acute Myeloid Leukemia Through Disruption of Myeloid Lineage Enhancers (Microarray)
GSE122162
CEBPA Dysfunction Intiates CSF3R Mutant Acute Myeloid Leukemia Through Disruption of Myeloid Lineage Enhancers (ChIP-seq)
GSE122163
CEBPA Dysfunction Intiates CSF3R Mutant Acute Myeloid Leukemia Through Disruption of Myeloid Lineage Enhancers (RNA-seq - orders)
GSE122164
CEBPA Dysfunction Intiates CSF3R Mutant Acute Myeloid Leukemia Through Disruption of Myeloid Lineage Enhancers (RNA-seq - simultaneous)
Relations
BioProject
PRJNA503877
Download family
Format
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TXT
Supplementary file
Size
Download
File type/resource
GSE122166_RAW.tar
13.7 Mb
(http)
(custom)
TAR (of CEL)
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