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Series GSE124407 Query DataSets for GSE124407
Status Public on Dec 18, 2019
Title BACH1 alters the expression of EMT-related genes to promote metastasis in pancreatic cancer [RNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary BTB and CNC homology 1 (BACH1) has been implicated in RAS-driven tumor formation. We focused on the role of BACH1 in Pancreatic ductal adenocarcinoma (PDAC), more than 90% of which have KRAS mutation. BACH1 directly or indirectly repressed the expression of genes for epithelial cell adhesion in AsPC-1 cells and SW1990. Knockdown and overexpression of BACH1 in PDAC cell lines indicated that BACH1 promoted cell migration and invasion in part by reducing E-cadherin expression.
 
Overall design Search of BACH1 target genes in pancreatic cancer cells
 
Contributor(s) Matsumoto M, Sato M, Funayama R, Nakayama K, Igarashi K
Citation(s) 31919242
Submission date Dec 27, 2018
Last update date Mar 18, 2020
Contact name Mitsuyo Matsumoto
E-mail(s) mitsuyo.matsumoto.d5@tohoku.ac.jp
Organization name Tohoku university school of medicine
Department Biochemistry
Street address 2-1 Seiryo-machi Aoba-ku
City Sendai
ZIP/Postal code 980-8575
Country Japan
 
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (12)
GSM3532120 AsPC1_siBACH1_RNAseq_rep1
GSM3532121 AsPC1_siBACH1_RNAseq_rep2
GSM3532122 AsPC1_siBACH1_RNAseq_rep3
This SubSeries is part of SuperSeries:
GSE124408 BACH1 alters the expression of EMT-related genes to promote metastasis in pancreatic cancer
Relations
BioProject PRJNA511965
SRA SRP174544

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124407_RNAseq_all_counts_matrix_sgRNA.txt.gz 557.6 Kb (ftp)(http) TXT
GSE124407_RNAseq_count_all_matrix_siRNA.txt.gz 564.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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