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Series GSE124412 Query DataSets for GSE124412
Status Public on Dec 28, 2018
Title Diminished OPA1 expression and impaired mitochondrial morphology and homeostasis in Aprataxin-deficient cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Ataxia with oculomotor apraxia type 1 (AOA1) is an early onset progressive spinocerebellar ataxia caused by mutation in aprataxin (APTX). Here we use RNA-seq to identify genes that are affected by APTX-KO, APTX overexpression, and APTX mutant, thus contributes to understadning the mechanisms underlying AOA1 pathlogy.

Published: https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkz083/5319145
 
Overall design Examination the chages of gene expressions in APTX proficient and APTX deficienc cells.
Web link https://doi.org/10.1093/nar/gkz083
 
Contributor(s) Zheng J, Croteau DL
Citation(s) 30986824
Submission date Dec 27, 2018
Last update date Apr 26, 2019
Contact name Jin Zheng
E-mail(s) zhj821107@icloud.com
Phone +4550245870
Organization name University of Copenhagen
Street address 3b Blegdamsvej
City Copenhagen
ZIP/Postal code 2200
Country Denmark
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (10)
GSM3532169 Control-1
GSM3532170 Control-2
GSM3532171 APTX-KO-1
Relations
BioProject PRJNA511981
SRA SRP174572

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124412_RAW.tar 18.3 Mb (http)(custom) TAR (of XLS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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