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Series GSE125134 Query DataSets for GSE125134
Status Public on Apr 24, 2019
Title Analysis of possible mechanisms behind functional recovery following neural progenitor cell transplantation into spinal cord injury.
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Long-term survival and integration of neural progenitor cells (NPCs) transplanted following spinal cord injury (SCI) have been observed. However, questions concerning the differentiation choice of NPCs, their mechanism of action and their contribution to functional recovery remains unanswered. Therefore, we investigated global transcriptomal changes in transplanted NPCs transplanted into SCI. We found that NPCs transplanted into SCI up-regulate genes related to nerve cell function and signaling and differentiation, and down-regulate genes related to cytokine signaling and apoptosis.
 
Overall design Stem cells transplantation in spinal cord injury in rodents
 
Contributor(s) Sankavaram S, Hakim R, Frostell A, Covacu R, Neumann S, Svensson M, Brundin L
Citation(s) 31031190
Submission date Jan 15, 2019
Last update date Jun 19, 2019
Contact name Mikael Svensson
E-mail(s) mikael.svensson@ki.se
Organization name Karolinska Institutet
Department Clinical neuroscience
Lab Svensson-Brundin
Street address Solnavägen 30
City Stockholm
State/province Stockholm
ZIP/Postal code 17177
Country Sweden
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (28)
GSM3564116 P9715_101
GSM3564117 P9715_102
GSM3564118 P9715_103
Relations
BioProject PRJNA515305
SRA SRP179652

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125134_merged_gene_counts.txt.gz 686.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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