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Series GSE125616 Query DataSets for GSE125616
Status Public on Oct 24, 2019
Title Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation embryo
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We studied the transcriptomic dynamics underlying human per-implantation development of trophoblast cells.
 
Overall design We obtained human peri-implantation embryos through blastocyst to early post -implantation stages using an in vitro coculture system, and profiled transcriptome of individual trophoblast cells collected from these embryos. By systematic analysis methods, we revealed the genetic networks regulating peri-implantation trophoblast development.
 
Contributor(s) An Q, Lv B
Citation Single-Cell RNA Sequencing Reveals Regulatory Mechanism for Trophoblast Cell-Fate Divergence in Human Peri-Implantation EmbryoBo Lv, Qin An, Qiao Zeng, Ping Lu, Xianmin Zhu, Yazhong Ji, Guoping Fan, Zhigang Xue; bioRxiv 567362; doi: https://doi.org/10.1101/567362
Submission date Jan 24, 2019
Last update date Oct 24, 2019
Contact name Qin An
E-mail(s) anqin314@gmail.com
Organization name ucla
Department Department of Human Genetics
Lab Guoping Fan Lab
Street address Room 6554 Gonda Building, UCLA
City los angeles
State/province CALIFORNIA
ZIP/Postal code 90024
Country USA
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (640)
GSM3578298 6A-11
GSM3578299 6A-13
GSM3578300 6A-14
Relations
BioProject PRJNA516921
SRA SRP181926

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125616_READ_COUNT_table_lvbo_TE_gencode.txt.gz 15.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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