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Series GSE127059 Query DataSets for GSE127059
Status Public on Jun 01, 2021
Title CircRNAs full-length sequencing in the human and mouse brain samples using Oxford Nanopore Technology
Organisms Homo sapiens; Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We optimized a protocol to enrich, digest and add poly(A) tail to the circular RNAs in order to make them compatible with the Oxfor Nanopore Technology for full-length sequencing
 
Overall design Circular RNAs from human cortex and total mouse brain was sequenced
 
Contributor(s) Rahimi K, Venø MT, Dupont  DM, Kjems J
Citation(s) 34376658
Submission date Feb 25, 2019
Last update date Sep 08, 2021
Contact name Morten T Veno
E-mail(s) morten.veno@omiics.com
Phone +45 28727107
Organization name Omiics ApS
Street address Aabogade 15
City Aarhus N
State/province DK
ZIP/Postal code 8200
Country Denmark
 
Platforms (4)
GPL23227 BGISEQ-500 (Homo sapiens)
GPL23479 BGISEQ-500 (Mus musculus)
GPL24106 MinION (Homo sapiens)
Samples (8)
GSM4966278 circNick-LRS_human_brain
GSM4966279 circNick-LRS_mouse_brain
GSM4966280 circPanel-LRS_human_brain
Relations
BioProject PRJNA524154
SRA SRP186781

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE127059_RAW.tar 28.0 Mb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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