|
| Status |
Public on Sep 16, 2008 |
| Title |
STAT1 transcription factor in Human HeLa S3 |
| Project |
ENCODE
|
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We report the results of chromatin immunoprecipitation following by high-thoughput tag sequencing (ChIP-Seq) using the GA II platform from Illumina for the human transcription factor STAT1 in HeLa S3 cells. The STAT1 ChIP was performed using HeLa S3 cells that are stimulated using gamma-interferon. We have also generated a seqenced input DNA dataset for gamma-interferon stimulated HeLa S3 cells.
Raw data for this study is available for download from the Short Read Archive database at:
http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?study=SRP000703.
For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
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| |
|
| Overall design |
Examination of the STAT1 transcription factor in Human HeLa S3.
|
| Web link |
http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
|
| |
|
| Contributor(s) |
Rozowsky J, Euskirchen G, Gerstein M, Snyder M |
| Citation(s) |
19122651 |
| BioProject |
PRJNA63447 |
| Submission date |
Sep 15, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
Flora Vaccarino |
| Organization name |
Yale University
|
| Department |
Child Study Center
|
| Lab |
Vaccarino
|
| Street address |
230 South Frontage Road
|
| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06520 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (2) |
|
| This SubSeries is part of SuperSeries: |
| GSE12783 |
Genome-wide maps of transcription factor binding using ChIP-Seq for Human ENCODE |
|
| Relations |
| SRA |
SRP000703 |
