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Series GSE129539 Query DataSets for GSE129539
Status Public on Aug 09, 2019
Title MiR-29 regulates de novo lipogenesis and controls circulating triglyceride levels in a Sirt1-dependent manner
Organisms Mus musculus; Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Investigation of the effect of miR-29 on de novo lipogenesis.
 
Overall design Measure lipid synthesis following perturbation of miR-29 using locked nucleic acids. Further investigate the role of SIRT1 on circulating lipids using a SIRT1-knockout model.
 
Contributor(s) Sethupathy P, Hung Y, Kanke M
Citation(s) 31736786
Submission date Apr 09, 2019
Last update date Nov 19, 2019
Contact name Praveen Sethupathy
Organization name Cornell University
Lab Dr. Sethupathy Lab
Street address Cornell University College of Veterinary Medicine, Box 17
City Ithica
State/province NY
ZIP/Postal code 14853
Country USA
 
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (37)
GSM3715131 WT/floxed - LNA29 #1 [WT2_LNA]
GSM3715132 WT/floxed - saline #1 [WT3_saline]
GSM3715133 WT/floxed - LNA29 #2 [WT4_LNA]
Relations
BioProject PRJNA531687
SRA SRP191571

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129539_DESeq_BT2_normalized_counts.csv.gz 556.1 Kb (ftp)(http) CSV
GSE129539_DESeq_SIRT1KO_normalized_counts.csv.gz 1.1 Mb (ftp)(http) CSV
GSE129539_DESeq_ZF_normalized_counts.csv.gz 640.0 Kb (ftp)(http) CSV
GSE129539_DESeq_wtflox_normalized_counts.csv.gz 1.6 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record
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