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Series GSE131289 Query DataSets for GSE131289
Status Public on Sep 24, 2019
Title Effects of social isolation stress on miRNA expression in the bed nucleus of stria terminalis (BNST) in male and female rats
Organism Rattus norvegicus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Purpose: This study assessed putative sex differences in miRNA expression in the bed nucleus of the stria terminalis (BNST)—a sexually dimorphic brain region implicated in anxiety—of adult male and female rats that had been exposed throughout adolescence to social isolation (SI) stress.
Methods: Male and female Sprague-Dawley rats underwent SI during adolescence or remained grouped housed (GH) till adulthood. Small RNA sequencing was performed on tissue extracted from the anterodorsal BNST.
Results: SI compared to GH induced more anxiogenic-like effects in females compared to males and sex-dependent changes in miRNA expression in the BNST.
Conclusions: The current study shows that housing conditions (either SI or GH) during adolescence regulates miRNA expression in a sex-specific manner in the sexually dimorphic area of the adBNST
 
Overall design Small RNA sequencing results were generated from the anterodorsal bed nucleus of stria terminalis (adBNST) of male and female group housed (GH) and socially isolated (SI) rats.
 
Contributor(s) Mavrikaki M, Pantano L, Potter D, Rogers-Grazado M, Amr S, Chartoff E
Citation(s) 31636537
Submission date May 15, 2019
Last update date Oct 28, 2019
Contact name Lorena Pantano
E-mail(s) lpantano@iscb.org
Organization name Harvard Chan School of Public Health
Department Biostatistics
Lab Bioinformatic Core
Street address 655 Huntington Ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (20)
GSM3768786 G16M-BNST
GSM3768787 G19M-BNST
GSM3768788 G18M-BNST
Relations
BioProject PRJNA543123
SRA SRP198536

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131289_RAW.tar 7.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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