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Series GSE131389 Query DataSets for GSE131389
Status Public on Jun 22, 2020
Title Global analyisis to study the bud27∆ and WT treated with rapamycin regarding to WT [RNA-seq]
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Summary RNA extraction for global analyisis and sequencing, to study the bud27∆ mutant and WT treated with rapamycin regarding to WT.
 
Overall design 2 samples for each condition are analyzed. It means, 2 for bud27D mutant, 2 for a wild-type (WT) strain treated with rapamycin to block TOR pathway, and 2 for a wt strain without treatment, used as a control.
 
Contributor(s) Navarro Gómez F
Citation(s) 32503921
Submission date May 17, 2019
Last update date Jun 22, 2020
Contact name Francisco Navarro
E-mail(s) fngomez@ujaen.es
Phone 0034953212771
Organization name Universidad de Jaén
Department Experimental Biology
Lab Genetic
Street address Campus Las Lagunillas s/n.
City Jaén
State/province Jaén
ZIP/Postal code 23071
Country Spain
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (6)
GSM3772984 WT rep1 [BY11]
GSM3772985 WT rep2 [BY12]
GSM3772986 bud27∆ rep1 [bud27rep1]
This SubSeries is part of SuperSeries:
GSE131390 Prefoldin-like Bud27 influences the transcription of ribosomal components and ribosome biogenesis in Saccharomyces cerevisiae
Relations
BioProject PRJNA543471
SRA SRP198753

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131389_RNA-Seq_Matrix.txt.gz 268.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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