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Series GSE132830 Query DataSets for GSE132830
Status Public on Jun 01, 2021
Title Response of synovial fibroblasts to TNFα and IL6/sIL6R
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Synovial fibroblasts (SF) are the main mesenchymal cell type constitutive in human synovial tissue. SF contribute to the homeostasis of normal joints by synthesizing extracellular matrix components and secreting the specific components of synovial fluid. SF are essential players in RA pathophysiology, they are the primary source of IL6 in the RA synovium contributing to perpetuate the inflammation in the joint.
We used microarrays analysis to characterize the effector pro-inflammatory response of SF to TNFα and IL6/sIL6R signaling.
 
Overall design Four SF lines from healthy donors stimulated for 24h with either TNFα (20ng/ml) or IL6 and sIL6R (20ng/ml each) was used to synthesize double-stranded cDNA (ds-cDNA) by using GeneChip 3’ IVT Pico Reagent Kit. The fragmented and labelled ds-cDNA was hybridized in Affymetrix GeneChip® PrimeView™ Human Gene Expression Array platform containing 49395 probesets.
 
Contributor(s) Valín Á, Del Rey MJ, Pablos JL
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Submission date Jun 17, 2019
Last update date Jun 02, 2021
Contact name Manuel J Del Rey
E-mail(s) ermanu3@yahoo.es
Phone 0034 91 3908766
Organization name Instituto de Investigación Hospital 12 de Octubre
Department Grupo de Enfermedades Inflamatorias y Autoinmunes
Street address Avda Córdoba s/n
City Madrid
ZIP/Postal code 20041
Country Spain
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (12)
GSM3893339 SF1 Control 24h
GSM3893340 SF1 IL6 24h
GSM3893341 SF1 TNF 24h
Relations
BioProject PRJNA549243

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132830_RAW.tar 27.6 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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