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| Status |
Public on Feb 03, 2020 |
| Title |
RNA-seq analysis after IRF4 and p65 knockdown in TL-Om1 cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq analysis was performed in an adult T-cell leukemia/lymphoma cell line (TL-Om1) to analyze gene expression changes after IRF4 or p65 knockdown.
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| |
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| Overall design |
Lentiviral shRNA transduction was carried out in TL-Om1 cells to knock down control (GFP), IRF4 or p65 gene. Two different shRNAs were used to target each gene in biological duplicates. Total RNA was harvested 3 days after knockdown and RNA-seq analysis was performed.
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| |
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| Contributor(s) |
Wong R, Tan TK, Sanda T |
| Citation(s) |
31972002 |
| Submission date |
Jun 19, 2019 |
| Last update date |
May 04, 2020 |
| Contact name |
Tze King Tan |
| Organization name |
National University of Singapore
|
| Department |
Cancer Science Institute
|
| Lab |
Takaomi Sanda Lab
|
| Street address |
14 Medical Drive
|
| City |
Singapore |
| ZIP/Postal code |
117599 |
| Country |
Singapore |
| |
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| Platforms (1) |
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| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE133042 |
Oncogenic Regulatory Network Driven by IRF4 and NF-kappaB in Adult T-cell Leukemia/Lymphoma |
|
| Relations |
| BioProject |
PRJNA549684 |
| SRA |
SRP201887 |
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