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| Status |
Public on Jun 22, 2020 |
| Title |
RNA sequencing for human induced pluripotent derived cerebral organoids |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Total RNA sequecing for human induced pluripotent derived cerebral organoids from healthy controls and schizophrenia (SCZ) patients
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| Overall design |
Comparing the disease state (SCZ) versus healthy control
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| Contributor(s) |
Kathuria A, Karmacharya R |
| Citation(s) |
32186681, 36915374 |
| Submission date |
Jun 28, 2019 |
| Last update date |
Jun 23, 2023 |
| Contact name |
Annie Kathuria |
| E-mail(s) |
kathu003@gmail.com
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| Organization name |
Mass Gen Hospital
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| Street address |
185 cambridge street
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02114 |
| Country |
USA |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (21)
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| GSM3911413 |
iPSC-derived cerebral organoids, 300CON.1 |
| GSM3911414 |
iPSC-derived cerebral organoids, 300CON.2 |
| GSM3911415 |
iPSC-derived cerebral organoids, 15CON |
| GSM3911416 |
iPSC-derived cerebral organoids, 51CON |
| GSM3911417 |
iPSC-derived cerebral organoids, 135CON.1 |
| GSM3911418 |
iPSC-derived cerebral organoids, 135CON.2 |
| GSM3911419 |
iPSC-derived cerebral organoids, 27CON |
| GSM3911420 |
iPSC-derived cerebral organoids, 22CON.1 |
| GSM3911421 |
iPSC-derived cerebral organoids, 22CON.2 |
| GSM3911422 |
iPSC-derived cerebral organoids, 56CON |
| GSM3911423 |
iPSC-derived cerebral organoids, 292CON |
| GSM3911424 |
iPSC-derived cerebral organoids, 67SZ.1 |
| GSM3911425 |
iPSC-derived cerebral organoids, 67SZ.2 |
| GSM3911426 |
iPSC-derived cerebral organoids, 33SZ |
| GSM3911427 |
iPSC-derived cerebral organoids, 123SZ |
| GSM3911428 |
iPSC-derived cerebral organoids, 141SZ |
| GSM3911429 |
iPSC-derived cerebral organoids, 233SZ |
| GSM3911430 |
iPSC-derived cerebral organoids, 40SZ.1 |
| GSM3911431 |
iPSC-derived cerebral organoids, 40SZ.2 |
| GSM3911432 |
iPSC-derived cerebral organoids, 250SZ |
| GSM3911433 |
iPSC-derived cerebral organoids, 164SZ |
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| Relations |
| BioProject |
PRJNA551698 |
| SRA |
SRP212636 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE133534_FPKM_org_SCZ.txt.gz |
3.1 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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