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Series GSE134749 Query DataSets for GSE134749
Status Public on Jul 24, 2019
Title Genome-wide CUT&RUN sequencing of H3K27me3 mark across different stages of T-cell development.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We present CUT&RUN sequencing of H3K27me3 for hematopoietic progenitor cells at the following differentiation stages: 1) cKit+ hematopoietic progenitor cells from bone marrow, 2) monoallelic Bcl11b expressing DN2 progenitors, which have one active and one inactive Bcl11b allele and 3) biallelic Bcl11b expressing DN2 progenitors, which have both Bcl11b alleles active
 
Overall design Examination of H3K27me3 in hematopoietic progenitors that have no Bcl11b expression, monoallelic Bcl11b expression, and biallelic Bcl11b expression
 
Contributor(s) Nguyen PH, Pease NA, Kueh HY
Citation(s) 33761349
Submission date Jul 23, 2019
Last update date Apr 13, 2021
Contact name Nicholas Pease
E-mail(s) peasen@uw.edu
Phone 6153082011
Organization name University of Washington
Street address 3720 15th Ave NE
City Seattle
State/province WA
ZIP/Postal code 98105
Country USA
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (6)
GSM3966742 cKit positive Bcl11b inactive trial 1
GSM3966744 cKit positive Bcl11b inactive trial 2
GSM3966745 Bcl11b monoallelic trial 1
Relations
BioProject PRJNA556261
SRA SRP216078

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134749_RAW.tar 333.3 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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