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Series GSE136457

Query DataSets for GSE136457

Status

Public on Aug 30, 2019

Title

TF ChIP-seq from MEL cell line (ENCSR033OWC)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ELF1 ChIP-seq mouse MEL produced by the Snyder lab

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR033OWC/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Aug 27, 2019

Last update date

Sep 30, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL9185

Illumina Genome Analyzer (Mus musculus)

Samples (2)

GSM4050830	TF ChIP-seq from MEL cell line (ENCLB947IFO)
GSM4050831	TF ChIP-seq from MEL cell line (ENCLB832RIH)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE136457_ENCFF017MEB_conservative_IDR_thresholded_peaks_mm10.bigBed	682.8 Kb	(ftp)(http)	BIGBED
GSE136457_ENCFF130MWN_peaks_and_background_as_input_for_IDR_mm10.bed.gz	5.2 Mb	(ftp)(http)	BED
GSE136457_ENCFF292UDW_peaks_mm9.bigBed	830.2 Kb	(ftp)(http)	BIGBED
GSE136457_ENCFF348YFB_conservative_IDR_thresholded_peaks_mm10.bed.gz	318.2 Kb	(ftp)(http)	BED
GSE136457_ENCFF350RQA_optimal_IDR_thresholded_peaks_mm10.bigBed	739.0 Kb	(ftp)(http)	BIGBED
GSE136457_ENCFF373NYF_signal_p-value_mm10.bigWig	282.8 Mb	(ftp)(http)	BIGWIG
GSE136457_ENCFF445ZZT_peaks_mm9.bed.gz	341.0 Kb	(ftp)(http)	BED
GSE136457_ENCFF493WJO_peaks_and_background_as_input_for_IDR_mm10.bigBed	12.5 Mb	(ftp)(http)	BIGBED
GSE136457_ENCFF507ODK_fold_change_over_control_mm10.bigWig	379.1 Mb	(ftp)(http)	BIGWIG
GSE136457_ENCFF885EHG_optimal_IDR_thresholded_peaks_mm10.bed.gz	355.0 Kb	(ftp)(http)	BED
GSE136457_RAW.tar	1.0 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record