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Series GSE136484

Query DataSets for GSE136484

Status

Public on Aug 30, 2019

Title

TF ChIP-seq from CH12.LX (ENCSR293WTN)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ELF1 ChIP-seq mouse CH12 produced by the Snyder lab

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR293WTN/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Aug 27, 2019

Last update date

Sep 30, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL9185

Illumina Genome Analyzer (Mus musculus)

Samples (2)

GSM4051036	TF ChIP-seq from CH12.LX (ENCLB252TNY)
GSM4051037	TF ChIP-seq from CH12.LX (ENCLB993DJT)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE136484_ENCFF382XAS_conservative_IDR_thresholded_peaks_mm10.bigBed	953.6 Kb	(ftp)(http)	BIGBED
GSE136484_ENCFF600CWP_fold_change_over_control_mm10.bigWig	400.4 Mb	(ftp)(http)	BIGWIG
GSE136484_ENCFF606SGT_optimal_IDR_thresholded_peaks_mm10.bigBed	995.8 Kb	(ftp)(http)	BIGBED
GSE136484_ENCFF683MGY_optimal_IDR_thresholded_peaks_mm10.bed.gz	512.6 Kb	(ftp)(http)	BED
GSE136484_ENCFF811MVO_peaks_mm9.bed.gz	467.3 Kb	(ftp)(http)	BED
GSE136484_ENCFF815EXJ_peaks_mm9.bigBed	1.0 Mb	(ftp)(http)	BIGBED
GSE136484_ENCFF873ENM_signal_p-value_mm10.bigWig	224.3 Mb	(ftp)(http)	BIGWIG
GSE136484_ENCFF890ZJF_peaks_and_background_as_input_for_IDR_mm10.bed.gz	5.4 Mb	(ftp)(http)	BED
GSE136484_ENCFF893ZYP_conservative_IDR_thresholded_peaks_mm10.bed.gz	484.1 Kb	(ftp)(http)	BED
GSE136484_ENCFF945FJO_peaks_and_background_as_input_for_IDR_mm10.bigBed	12.3 Mb	(ftp)(http)	BIGBED
GSE136484_RAW.tar	951.2 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record