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Series GSE138123 Query DataSets for GSE138123
Status Public on Sep 17, 2020
Title METTL5, an 18S rRNA-specific m6A methyltransferase, regulates the Integrated Stress Response [eCLIP]
Organism Homo sapiens
Experiment type Other
Summary RNA N6-methyladenosine (m6A) modification is present in different RNA molecules, including protein-coding mRNAs and non-coding RNAs such as ribosomal RNAs (rRNAs).Here, we report that mammalian METTL5, a member of a highly conserved methyltransferase family, specifically methylates adenosine 1832 (A1832) in the 18S rRNA in vivo and in vitro.
 
Overall design We used eCLIP-seq to identify the binding targets of METTL5 in human 293T cells.
Web link https://www.biorxiv.org/content/10.1101/2020.04.27.064162v2
 
Contributor(s) Chen H, Shi Y
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 27, 2019
Last update date Sep 17, 2020
Contact name Yang Shi
Organization name BOSTON CHILDREN'S HOSPITAL
Department NEWBORN MEDICINE
Street address 320 LONGWOOD AVE
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (3)
GSM4100711 Input
GSM4100712 eCLIP_1
GSM4100713 eCLIP_2
Relations
BioProject PRJNA574656
SRA SRP223540

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138123_rRNA-counts.xlsx 405.3 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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