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Series GSE141801 Query DataSets for GSE141801
Status Public on Jan 24, 2020
Title Contribution of mTOR and PTEN to Radioresistance in Sporadic and NF2-Associated Vestibular Schwannomas: A Microarray and Pathway Analysis.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The use of radiation treatment has increased for both sporadic and neurofibromatosis type 2 (NF2)-associated vestibular schwannoma (VS). However, there are a subset of radioresistant tumors and systemic treatments that are seldom used in these patients. We investigated molecular alterations after radiation in three NF2-associated and five sporadically operated recurrent VS after primary irradiation. We compared these findings with 49 non-irradiated (36 sporadic and 13 NF2-associated) VS through gene-expression profiling and pathway analysis. Furthermore, we stained the key molecules of the distinct pathway by immunohistochemistry. A total of 195 differentially expressed genes in sporadic and NF2-related comparisons showed significant differences based on the criteria of p value < 0.05 and a two-fold change. These genes were involved in pathways that are known to be altered upon irradiation (e.g., mammalian target of rapamycin (mTOR), phosphatase and tensin homolog (PTEN) and vascular endothelial growth factor (VEGF) signaling). We observed a combined downregulation of PTEN signaling and an upregulation of mTOR signaling in progressive NF2-associated VS after irradiation. Immunostainings with mTOR and PTEN antibodies confirmed the respective molecular alterations. Taken together, mTOR inhibition might be a promising therapeutic strategy in NF2-associated VS progress after irradiation.
 
Overall design We used microdissected tumor samples of 9 recurrent irradiated VS (5 sporadic, 1 cystic and 3 NF2-associated VS), 36 sporadic, 13 NF2 associated and 9 cystic associated non-irradiated controls. There are also 7 controls of vestibular nerve tissue that were obtained post mortem.
 
Contributor(s) Gugel I, Tabatabai G, Czemmel S
Citation(s) 31936793
Submission date Dec 10, 2019
Last update date Jan 26, 2020
Contact name Stefan Czemmel
Organization name Quantitative Biology Center (QBiC)
Department University of Tuebingen
Street address Auf der Morgenstelle 10
City Tuebingen
ZIP/Postal code 72076
Country Germany
 
Platforms (1)
GPL13667 [HG-U219] Affymetrix Human Genome U219 Array
Samples (74)
GSM4213422 I10R026a03_173/07 ; Nervous system
GSM4213423 I10R026a04_182/07 ; Nervous system
GSM4213424 I10R026a06_189/07 ; Nervous system
Relations
BioProject PRJNA594756

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Supplementary file Size Download File type/resource
GSE141801_RAW.tar 151.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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