|
| Status |
Public on Dec 21, 2019 |
| Title |
Integration of whole-genome DNA methylation data with RNA sequencing data to identify markers for bull fertility |
| Organism |
Bos taurus |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
Predicting dairy bull fertility is a current challenge for the dairy industry. The goal of this study was to integrate DNA methylation data with previously published RNA sequencing results in order to identify candidate markers for sire fertility.
|
| |
|
| Overall design |
Five high-fertility bulls and five low-fertility bulls were used for this study. Sperm samples were subjected to DNA extraction and subsequent whole-genome bisulfite sequencing.
|
| |
|
| Contributor(s) |
Khatib H, Peñagaicano F |
| Citation(s) |
32323873 |
| Submission date |
Dec 20, 2019 |
| Last update date |
Jun 03, 2020 |
| Contact name |
Francisco Peñagaricano |
| E-mail(s) |
fpenagarican@wisc.edu
|
| Organization name |
University of Wisconsin-Madison
|
| Department |
Animal and Dairy Sciences
|
| Street address |
1675 Observatory Drive
|
| City |
Madison |
| State/province |
Wisconsin |
| ZIP/Postal code |
53706 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL23055 |
Illumina NextSeq 500 (Bos taurus) |
|
| Samples (10)
|
|
| Relations |
| BioProject |
PRJNA597076 |
| SRA |
SRP238442 |
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