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Series GSE143207 Query DataSets for GSE143207
Status Public on Mar 16, 2020
Title Defining the Secrebiome: the expressed secretome of the gut microbiome and its role in obese Mexican children
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary high throughput sequencing of the metagenome of mexican children
 
Overall design RNA seq from fecal samples of Mexican children
 
Contributor(s) Gallardo-Becerra L, Cornejo-Granados F, García-López R, Valdez-Lara A, Bikel S, Canizales-Quinteros S, López-Contreras B, Mendoza-Vargas A, Nielsen H, Ochoa-Leyva A
Citation(s) 32143621
Submission date Jan 06, 2020
Last update date Mar 16, 2020
Contact name Fernanda Cornejo
E-mail(s) fer.cornejog@gmail.com
Organization name Instituto de Biotecnología UNAM
Street address Av Universidad 2001
City Cuernavaca
ZIP/Postal code 62100
Country Mexico
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (8)
GSM4252140 015
GSM4252141 164
GSM4252142 024
Relations
BioProject PRJNA600247
SRA SRP240931

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE143207_RAW.tar 22.7 Mb (http)(custom) TAR (of TXT)
GSE143207_full_transcripts_file.fasta.gz 27.9 Mb (ftp)(http) FASTA
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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