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| Status |
Public on Nov 10, 2021 |
| Title |
Genome wide chromatin changes in Wild Type and DDX5 knockdown of GC cells [RNA polymerase II ChIP-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
DDX5 (DEAD-Box Helicase 5) plays a role as an adaptor molecule, is involved in a variety of cellular processes. Here, we performed ChIP-seq with antibody specific for RNA Polymerase II in HGC-27 cells after transduction with lentivirus harboring DDX5 shRNA or non-targeting shRNA.
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| Overall design |
Two samples were examined: HGC-27 cells transduced with lentivirus harboring DDX5 shRNA or non-targeting shRNA.
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| Contributor(s) |
Yang M, Zheng Y |
| Citation(s) |
34472665 |
| Submission date |
Mar 05, 2020 |
| Last update date |
Nov 10, 2021 |
| Contact name |
Yan Zheng |
| E-mail(s) |
cnfu@sina.com
|
| Phone |
+8653167626536
|
| Organization name |
Shandong Cancer Hospital Affiliated to Shandong University
|
| Department |
Shandong Provincial Key Laboratory of Radiation Oncology
|
| Lab |
Cancer Research Center
|
| Street address |
No.440 Jiyan road
|
| City |
Jinan |
| State/province |
Shandong |
| ZIP/Postal code |
250117 |
| Country |
China |
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| Platforms (1) |
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| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE146431 |
Genome wide chromatin and transcriptome changes of Wild Type and DDX5 knockdown of GC cells |
|
| Relations |
| BioProject |
PRJNA610572 |
| SRA |
SRP251712 |
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