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Series GSE147447 Query DataSets for GSE147447
Status Public on Mar 25, 2020
Title GATA6 induces cell senescence to exerts lung cancer suppressive function and denotes a therapeutic opportunity for GATA6 deficient lung cancer patients
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Lung cancer is the world-wide leading cause of cancer related deaths. Tumor suppressor genes (TSGs) play a critical role in restricting tumorigenesis and impact the therapeutic effect of various treatments. However, TSGs remain to be systemically determined in lung cancer. Here we identified GATA6 as a potent lung cancer TSG. GATA6 inhibited lung cancer cell growth in vitro and tumorigenesis in vivo. Mechanistically, GATA6 upregulated p53 expression to transcribe p21 mRNA while inhibited Akt activation to stabilize p21 protein, thus inducing lung cancer cell senescence. Furthermore, we showed that ectopic expression of GATA6 led to dramatic shrinkage of established lung tumor in vivo
 
Overall design A549-TetOne-GATA6 cells were treated with(positive) or without DOX (negative)for 48 h, then total RNA was isolated from cells using Trizol reagent (TAKARA, Japan). RNA libraries and RNA sequencing were performed by The Beijing Genomics Institute (BGI)
 
Contributor(s) Chen W, Chen Z
Citation(s) 32596145
Submission date Mar 24, 2020
Last update date Jul 15, 2020
Contact name Chen Zhipeng
E-mail(s) cws2017@stu2017.jun.edu.cn
Organization name Jinan University
Street address Huangpu Avenue
City Guangzhou
ZIP/Postal code 510632
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (2)
GSM4430934 control
GSM4430935 positive
Relations
BioProject PRJNA614904
SRA SRP253842

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147447_DEPs.csv.gz 31.3 Kb (ftp)(http) CSV
GSE147447_Expression_profiling.csv.gz 11.3 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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