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Series GSE147846 Query DataSets for GSE147846
Status Public on Dec 31, 2020
Title DNA Methyltransferase 3A Mediates the Sustained Effects of Stress on Synaptic Functions and Behaviors [RRBS]
Organism Rattus norvegicus
Experiment type Methylation profiling by high throughput sequencing
Summary Emerging evidence suggests that epigenetic mechanisms regulate aberrant gene transcription in stress-associated mental disorders. However, it remains to be elucidated about the role of DNA methylation and its catalyzing enzymes, DNA methyltransferases (DNMTs), in this process. Here we found that rats exposed to chronic (2-week) unpredictable stress exhibited a substantial reduction of Dnmt3a after stress cessation in the prefrontal cortex (PFC), a key target region of stress. Treatment of unstressed control rats with DNMT inhibitors recapitulated the effect of chronic unpredictable stress on decreased AMPAR expression and function in PFC. In contrast, overexpression of Dnmt3a in PFC of stressed animals prevented the loss of glutamatergic responses. Moreover, the stress-induced behavioral abnormalities, including the impaired recognition memory and aggressive behaviors, were ameliorated by Dnmt3a expression in PFC of stressed animals. Lastly, we found genome-wide DNA methylation changes in PFC of stressed rats are selectively enriched at several pathways, such as axon guidance, Wnt signaling and neurotransmission. These findings have therefore recognized the role of DNA epigenetic modification in stress-induced disturbance of synaptic functions and cognitive & emotional processes.
 
Overall design 4 samples (PFC tissue from one rat/sample) in each group are analyzed 
 
Contributor(s) Wei J, Cheng J, Waddell NJ, Wang Z, Pang X, Liu A, Chitaman JM, Duffney LJ, Zhang J, Dietz DM, Feng J, Yan Z
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Submission date Mar 31, 2020
Last update date Jan 02, 2021
Contact name Nicholas James Waddell
E-mail(s) nwaddell@fsu.edu
Organization name Florida State University
Department Biological Sciences
Lab Laboratory of Jian Feng
Street address 319 Stadium Dr
City Tallahassee
State/province FL
ZIP/Postal code 32306
Country USA
 
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (8)
GSM4447036 C1_RRBS
GSM4447037 C2_RRBS
GSM4447038 C3_RRBS
This SubSeries is part of SuperSeries:
GSE147847 DNA Methyltransferase 3A Mediates the Sustained Effects of Stress on Synaptic Functions and Behaviors
Relations
BioProject PRJNA622272
SRA SRP254796

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147846_RAW.tar 15.7 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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