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Series GSE149076 Query DataSets for GSE149076
Status Public on May 01, 2020
Title Cell-type specific gene expression profiling in heterogeneous in vitro cultures using epitope-tagged RPL22
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Here we report the use of RPL22-Flag, RPL22-V5, and RPL22-HA to co-immunoprecipitate RNA from specific cell populations
 
Overall design Examination of RPL22-HA and RPL22-V5 in HEK293 and NIH3T3 cells, respectively, in co-culture.
 
Contributor(s) Gregory JA
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Submission date Apr 21, 2020
Last update date May 03, 2020
Contact name James Gregory
E-mail(s) james.alan.gregory@gmail.com, jgregory@nygenome.org
Organization name New York Genome Center
Lab Center for Genomics of Neurodegenerative Disease
Street address 101 Ave of the Americas
City New York
State/province NY
ZIP/Postal code 10013
Country USA
 
Platforms (3)
GPL15520 Illumina MiSeq (Homo sapiens)
GPL16417 Illumina MiSeq (Mus musculus)
GPL19969 Illumina MiSeq (Homo sapiens; Mus musculus)
Samples (7)
GSM4490146 R1_input_control
GSM4490147 R6_HEK293_151_input_control
GSM4490148 R3_3T3_143_input_control
Relations
BioProject PRJNA627241
SRA SRP257799

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149076_RAW.tar 57.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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