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Series GSE149612 Query DataSets for GSE149612
Status Public on Apr 30, 2020
Title Multi-omics analysis reveals divergent epigenetic regulation of gene expression and drivers of esophageal squamous cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32699215
Submission date Apr 29, 2020
Last update date Jul 27, 2020
Contact name Wei Wu
E-mail(s) wei.wu@ucsf.edu
Phone 4157669898
Organization name University of California, San Franciso
Department Department of Medicine
Lab Trever Bivona
Street address 600 16th street
City San Francisco
State/province CA
ZIP/Postal code 94143
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (55)
GSM4505856 normal N1 WGBS
GSM4505857 normal N2 WGBS
GSM4505858 normal N6 WGBS
This SuperSeries is composed of the following SubSeries:
GSE149608 Multi-omics analysis reveals divergent epigenetic regulation of gene expression and drivers of esophageal squamous cell carcinoma (WGBS)
GSE149609 Multi-omics analysis reveals divergent epigenetic regulation of gene expression and drivers of esophageal squamous cell carcinoma (RNA-Seq)
GSE151838 Multi-omics analysis reveals divergent epigenetic regulation of gene expression and drivers of esophageal squamous cell carcinoma [ChIP-seq]
Relations
BioProject PRJNA629352

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149612_RAW.tar 2.5 Gb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp

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