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| Status |
Public on Sep 30, 2009 |
| Title |
Radiation effects on gene expression in rat testes (Rattus norvegicus) |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
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| Summary |
Analysis of LBNF1 rat testes from controls, containing both somatic and all germ cell types and from irradiated rats in which all cells germ cells except type A spermatgogonia are eliminated. Results provide insight into distinguishing germ and somatic cell genes and identification of somatic cell genes that are upregulated after irradiation.
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| Overall design |
We studied 10 Sample replicates of control rat testes and 5 Sample replicates of irradiated rat testes.
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| Contributor(s) |
Zhou W, Bolden-Tiller OU, Shetty G, Shao SH, Weng CC, Pakarinen P, Liu Z, Stivers DN, Meistrich ML |
| Citation(s) |
19684331 |
| Submission date |
Mar 13, 2009 |
| Last update date |
Jul 31, 2017 |
| Contact name |
Wei Zhou |
| E-mail(s) |
wzhou@mdanderson.org
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| Fax |
7137945369
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| Organization name |
M.D.Anderson Cancer Center
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| Department |
Department of Experimental Radiation Oncology
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| Street address |
1515 Holcombe Blvd
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| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
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| Platforms (1) |
| GPL1355 |
[Rat230_2] Affymetrix Rat Genome 230 2.0 Array |
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| Samples (15)
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| GSM380154 |
Control rat testes, biological rep 1 |
| GSM380155 |
Control rat testes, biological rep 2 |
| GSM380156 |
Control rat testes, biological rep 3 |
| GSM380157 |
Control rat testes, biological rep 4 |
| GSM380158 |
Control rat testes, biological rep 5 |
| GSM380159 |
Control rat testes, biological rep 6 |
| GSM380160 |
Control rat testes, biological rep 7 |
| GSM380161 |
Control rat testes, biological rep 8 |
| GSM380162 |
Control rat testes, biological rep 9 |
| GSM380163 |
Control rat testes, biological rep 10 |
| GSM380164 |
Irradiated rat testes, biological rep 1 |
| GSM380165 |
Irradiated rat testes, biological rep 2 |
| GSM380166 |
Irradiated rat testes, biological rep 3 |
| GSM380167 |
Irradiated rat testes, biological rep 4 |
| GSM380168 |
Irradiated rat testes, biological rep 5 |
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| Relations |
| BioProject |
PRJNA116475 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE15223_RAW.tar |
42.2 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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