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Series GSE153316 Query DataSets for GSE153316
Status Public on Jan 15, 2024
Title Gene expression profiles of adipose tissue adjacent to and distant from breast cancer
Organism Homo sapiens
Experiment type Expression profiling by array
Summary It is widely recognized that cancer development and progression depend not only on tumor-cell intrinsic factors but also on its microenvironment and on the host characteristics. Adipocytes are the main stromal cells in the breast and an heterotypic interaction between breast epithelial cells and adipocytes has been demonstrated. To date, the alterations associated with adipocyte dedifferentiation has to be further studied, especially in patients. The aim of our work is to compare gene expression profile of adipose tissue adjacent to and distant from breast cancer in patients.
 
Overall design Adipose tissues (AT) were collected during standard surgical approaches from 2015 to 2017 from 41 patients subjected to mastectomy. AT adjacent (within 2 cm from the reference tumor) to the tumor tissue and far from the tumor (preferentially more than 10 cm from the tumor and in general at the opposite site, peripherically) were obtained for each patient.
 
Contributor(s) De Cecco L
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Submission date Jun 26, 2020
Last update date Jan 16, 2024
Contact name Loris De Cecco
E-mail(s) loris.dececco@istitutotumori.mi.it
Organization name IRCSS Istituto Nazionale Tumori
Street address via Venezian 1
City Milan
ZIP/Postal code 20133
Country Italy
 
Platforms (1)
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (82)
GSM4640287 JT75_AT_distant_Pz1
GSM4640288 JT76_AT_adjacent_Pz1
GSM4640289 JT77_AT_distant_Pz2
Relations
BioProject PRJNA642129

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153316_RAW.tar 90.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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