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Series GSE153977 Query DataSets for GSE153977
Status Public on Feb 16, 2022
Title Transcriptional profile of tumor associated macrophages in High fat diet mouse models
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Tumor associated macrophages (TAMs) are correlated with the progression of prostatic adenocarcinoma (PCa) but are still poorly described in this context. Here we applied high dimensional single-cell RNA-seq to profile the transcriptional landscape of TAMs in PCa. We identified a subset of tumor infiltrating macrophages that shows a dysregulation in transcriptional pathways associated with lipid metabolism. In human and mouse models of PCa this subset of macrophages expresses the scavenger receptor MARCO and is characterized by accumulation of lipid droplets. We identified a gene signature derived from MARCO-expressing TAMs that correlates with PCa progression and is associated with shorter disease-free survival. Mechanistically, we observed that lipid accumulation in TAMs is promoted by the secretome of cancer cells. Lipid-loading confers on tumor-conditioned macrophages the capability to promote cancer cell migration mediated by CCL6. Importantly, administration of high fat diet to tumor-bearing mice raises lipid accumulation in TAMs and affects their transcriptional profile. Finally, we demonstrate that the accumulation of lipids in macrophages is dependent on MARCO expression and we show that MARCO blockade hinders tumor growth and invasiveness in models of advanced PCa. Our findings provide evidence that lipid-loaded TAMs represent a new therapeutic target in PCa.
 
Overall design Tota RNA-seq of tumor associated macrophage sorted by prostate tissue in mouse models of high fat diet
 
Contributor(s) Carriero R, Masetti M, Di Mitri D
Citation(s) 34919143
Submission date Jul 07, 2020
Last update date Feb 18, 2022
Contact name Roberta Carriero
E-mail(s) roberta.carriero@humanitasresearch.it
Organization name Humanitas Research Hospital
Street address Via Rita Levi Montalcini,4
City Pieve Emanuele
State/province MI
ZIP/Postal code 20090
Country Italy
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (4)
GSM4661300 NFD 1
GSM4661301 NFD 2
GSM4661302 HFD 1
Relations
BioProject PRJNA644630
SRA SRP270822

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153977_RAW.tar 4.6 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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