NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE154331 Query DataSets for GSE154331
Status Public on Nov 26, 2020
Title Expression data from PTC cell lines transfected with FAM60A-shRNA
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The mRNA and protein levels of FAM60A were significantly upregulated in PTC cancer tissues compared with paired normal tissue. Knockdown of FAM60A1 in TPC-1 and K1 significantly supressed cell growth, colony formation ability, tumor invasion, and phase transition of the cell cycle.
We used microarrays to investigate the gene expression alterations of PTC cells after FAM60A knockdown by shRNA.
 
Overall design FAM60A-shRNA-expressing and control-shRNA-expressing lentivirus were constructed and infected into PTC cancer cells TPC-1. Then total RNA was prepared for RNA extraction and hybridization on Affymetrix microarrays. Three independent samples were collected for each group.
 
Contributor(s) Sun Q, Guo M, Geng H
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 13, 2020
Last update date Nov 28, 2020
Contact name Qiang Sun
E-mail(s) sunqiangzai@126.com
Organization name Xuzhou Medical University
Department Cancer institute
Lab Sun
Street address 209 Tongshan Road, Xuzhou City, China
City Xuzhou
State/province Jiangsu
ZIP/Postal code 221004
Country China
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (6)
GSM4669125 TPC-1-shControl_replicate1
GSM4669126 TPC-1-shControl_replicate2
GSM4669127 TPC-1-shControl_replicate3
Relations
BioProject PRJNA645900

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154331_RAW.tar 11.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap