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Series GSE156308 Query DataSets for GSE156308
Status Public on Nov 16, 2020
Title exosomal ELNAT1 promotes lymphatic metastasis of bladder cancer
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The crosstalk between tumor cells and LECs triggers the LN metastasis in bladder cancer (BCa), but the underlying mechanisms are not completely understood. Previously, we identified that BCa-secreted extracellular vesicles (EVs)-packaged lncRNAs mediated the communication with LECs and promoted LN metastasis. To evaluate whether EV-packaged lncRNAs triggered the LN metastasis of BCa, next-generation sequencing (NGS) to the global expression profiles of lncRNAs was utilized in the urinary EVs (urinary-EV) of five MIBC patients and five healthy volunteers.
 
Overall design To identify EV-packaged lncRNAs involved in the progression of bladder cancer, NGS was performed in the urinary EVs of five MIBC patients and five healthy volunteers. The RNA from urinary EVs was extracted and enriched with PCR to create the final cDNA library, which was sequenced pair end on the BGISEQ-500/ MGISEQ-2000 System.
 
Contributor(s) Chen C, Lin T
Citation(s) 33661764
Submission date Aug 16, 2020
Last update date May 27, 2022
Contact name Yuming Luo
Organization name Sun yat-sen Memorial Hospital
Department General Surgery
Street address 107 Yanjiang West Avenue,Yuexiu district
City Guangzhou
State/province Guangdong
ZIP/Postal code 510120
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (10)
GSM4728787 CA1
GSM4728788 CA2
GSM4728789 CA3
Relations
BioProject PRJNA657414
SRA SRP277627

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE156308_processed_data.txt.gz 923.1 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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